Evidence map›Paper›PMID 29045501›Full record

ArticlePloS one2017

Scaffold dependent histone deacetylase (HDAC) inhibitor induced re-equilibration of the subcellular localization and post-translational modification state of class I HDACs.

Thomas W Hanigan, Taha Y Taha, Shaimaa M Aboukhatwa, Jonna Frasor, Pavel A Petukhov

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Thomas W HaniganDepartment of Medicinal Chemistry and Pharmacognosy, University of Illinois at Chicago, Chicago, Illinois, United States of America.
Taha Y TahaDepartment of Medicinal Chemistry and Pharmacognosy, University of Illinois at Chicago, Chicago, Illinois, United States of America.ORCID http://orcid.org/0000-0002-7344-7490
Shaimaa M AboukhatwaDepartment of Medicinal Chemistry and Pharmacognosy, University of Illinois at Chicago, Chicago, Illinois, United States of America.
Jonna FrasorDepartment of Physiology and Biophysics, University of Illinois at Chicago, Chicago, Illinois, United States of America.
Pavel A PetukhovDepartment of Medicinal Chemistry and Pharmacognosy, University of Illinois at Chicago, Chicago, Illinois, United States of America.ORCID http://orcid.org/0000-0003-1554-242X
University of Illinois Chicago · USTanta University · EG

Funding

Generating Human Cord-Blood-Derived Functional Megakaryocytes and platelets.R01HL130760 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI MAHMUD, NADIM, MILLER, WILLIAM M · 2015 to 2018
$1.7M
Photoaffinity labeling probes for development of novel isoform selective HDAC inhR01CA131970 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI PETUKHOV, PAVEL A · 2008 to 2011
$1.3M
Photoreactive histone deacetylase probes for chromatin immunoprecipitation in canR21CA183627 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI FRASOR, JONNA, PETUKHOV, PAVEL A · 2014 to 2016
$666k
NCI NIH HHS R01 CA131970NCI NIH HHS R21 CA183627NHLBI NIH HHS R01 HL130760
6 · The paper itself

Abstract

The mechanism of action of histone deacetylase inhibitors (HDACi) is mainly attributed to the inhibition of the deacetylase catalytic activity for their histone substrates. In this study, we analyzed the abundance of class I HDACs in the cytosolic, nuclear soluble and chromatin bound cellular fractions in breast cancer cells after HDACi treatment. We found that potent N-hydroxy propenamide-based HDACi induced a concentration dependent decrease in the HDAC1 associated with chromatin and a lasting concomitant increase in cytoplasmic HDAC1 while maintaining total protein expression. No such change occurred with HDAC2 or 8, however, an increase in cytoplasmic non-phosphorylated HDAC3 was also observed. The subcellular re-equilibration of HDAC1 was subsequent to the accumulation of acetylated histones and might be cell cycle dependent. This study suggests that the biological activity of a subset of N-hydroxy propenamide-based HDACi may stem from direct competition with histone substrates of HDACs as well as from spatial separation from their substrates in the nucleus and/or change in post-translational modification status of HDACs.

Indexed as

AcetylationCytosolHistone Deacetylase InhibitorsHistone DeacetylasesHistonesHumansMCF-7 CellsMicroscopy, ConfocalMitogensModels, BiologicalPhosphorylationProtein Processing, Post-TranslationalProtein TransportSubcellular FractionsHistone Deacetylase InhibitorsHistone DeacetylasesHistonesMitogens

Identifiers

PMID29045501
PMCPMC5646865
OpenAlexW2765877302

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.