Evidence map›Paper›PMID 29045490›Full record

ArticlePloS one2017

The ethylene response factor AtERF4 negatively regulates the iron deficiency response in Arabidopsis thaliana.

Wei Liu, N J Umuhoza Karemera, Ting Wu, Yafei Yang, Xinzhong Zhang, Xuefeng Xu, Yi Wang, Zhenhai Han

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
10.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 62 citations in OpenAlex.

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  11. Gadolinium ProtectsInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Wei LiuInstitute for Horticultural Plants, College of Horticulture, China Agricultural University, Beijing, China.
N J Umuhoza KaremeraInstitute for Horticultural Plants, College of Horticulture, China Agricultural University, Beijing, China.
Ting WuInstitute for Horticultural Plants, College of Horticulture, China Agricultural University, Beijing, China.
Yafei YangInstitute for Horticultural Plants, College of Horticulture, China Agricultural University, Beijing, China.
Xinzhong ZhangInstitute for Horticultural Plants, College of Horticulture, China Agricultural University, Beijing, China.
Xuefeng XuInstitute for Horticultural Plants, College of Horticulture, China Agricultural University, Beijing, China.
Yi WangInstitute for Horticultural Plants, College of Horticulture, China Agricultural University, Beijing, China.ORCID http://orcid.org/0000-0002-6303-385X
Zhenhai HanInstitute for Horticultural Plants, College of Horticulture, China Agricultural University, Beijing, China.
China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Iron (Fe) deficiency is one of many conditions that can seriously damage crops. Low levels of photosynthesis can lead to the degradation of chlorophyll content and impaired respiration in affected plants, which together cause poor growth and reduce quality. Although ethylene plays an important role in responses to Fe deficiency, a limited number of studies have been carried out on ethylene response factor (ERFs) as components of plant regulation mechanisms. Thus, this study aimed to investigate the role of AtERF4 in plant responses to Fe deficiency. Results collected when Arabidopsis thaliana was grown under Fe deficient conditions as well as in the presence of 1-aminocyclopropane-1-carboxylic acid (ACC) revealed that leaf chlorosis did not occur over short timescales and that chloroplast structural integrity was retained. At the same time, expression of the chlorophyll degradation-related genes AtPAO and AtCLH1 was inhibited and net H+ root flux was amplified. Our results show that chlorophyll content was enhanced in the mutant erf4, while expression of the chlorophyll degradation gene AtCLH1 was reduced. Ferric reductase activity in roots was also significantly higher in the mutant than in wild type plants, while erf4 caused high levels of expression of the genes AtIRT1 and AtHA2 under Fe deficient conditions. We also utilized yeast one-hybrid technology in this study to determine that AtERF4 binds directly to the AtCLH1 and AtITR1 promoter. Observations show that transient over-expression of AtERF4 resulted in rapid chlorophyll degradation in the leaves of Nicotiana tabacum and the up-regulation of gene AtCLH1 expression. In summary, AtERF4 plays an important role as a negative regulator of Fe deficiency responses, we hypothesize that AtERF4 may exert a balancing effect on plants subject to nutrition stress.

Indexed as

Iron DeficienciesAmino Acid MotifsAmino Acids, CyclicAmino Acid SequenceArabidopsisArabidopsis ProteinsChlorophyllEthylenesGene Expression Regulation, PlantGenes, PlantGlycineModels, BiologicalMutationPhenotypePlant RootsRepressor Proteins1-aminocyclopropane-1-carboxylic acidAmino Acids, CyclicaminoethoxyvinylglycineArabidopsis ProteinsChlorophyllERF4 protein, ArabidopsisethyleneEthylenesGlycineRepressor Proteins

Identifiers

PMID29045490
PMCPMC5646859
OpenAlexW2765299678

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.