Evidence map›Paper›PMID 29045454›Full record

ArticlePloS one2017

Insights into the inhibited form of the redox-sensitive SufE-like sulfur acceptor CsdE.

Esther Peña-Soler, Juan Aranda, Miguel López-Estepa, Sara Gómez, Fernando Garces, Miquel Coll, Francisco J Fernández, Iñaki Tuñon, M Cristina Vega

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Esther Peña-SolerChemical and Physical Biology Department, Center for Biological Research (CIB-CSIC), Madrid, Spain.
Juan ArandaDepartamento de Química Física, Universitat de València, Burjassot, Spain.
Miguel López-EstepaChemical and Physical Biology Department, Center for Biological Research (CIB-CSIC), Madrid, Spain.
Sara GómezChemical and Physical Biology Department, Center for Biological Research (CIB-CSIC), Madrid, Spain.
Fernando GarcesThe Scripps Research Institute, La Jolla, California, United States of America.
Miquel CollInstitut de Biologia Molecular de Barcelona (IBMB-CSIC), Barcelona, Spain.
Francisco J FernándezChemical and Physical Biology Department, Center for Biological Research (CIB-CSIC), Madrid, Spain.
Iñaki TuñonDepartamento de Química Física, Universitat de València, Burjassot, Spain.
M Cristina VegaChemical and Physical Biology Department, Center for Biological Research (CIB-CSIC), Madrid, Spain.ORCID http://orcid.org/0000-0003-0628-8378

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sulfur trafficking in living organisms relies on transpersulfuration reactions consisting in the enzyme-catalyzed transfer of S atoms via activated persulfidic S across protein-protein interfaces. The recent elucidation of the mechanistic basis for transpersulfuration in the CsdA-CsdE model system has paved the way for a better understanding of its role under oxidative stress. Herein we present the crystal structure of the oxidized, inactivated CsdE dimer at 2.4 Å resolution. The structure sheds light into the activation of the Cys61 nucleophile on its way from a solvent-secluded position in free CsdE to a fully extended conformation in the persulfurated CsdA-CsdE complex. Molecular dynamics simulations of available CsdE structures allow to delineate the sequence of conformational changes underwent by CsdE and to pinpoint the key role played by the deprotonation of the Cys61 thiol. The low-energy subunit orientation in the disulfide-bridged CsdE dimer demonstrates the likely physiologic relevance of this oxidative dead-end form of CsdE, suggesting that CsdE could act as a redox sensor in vivo.

Indexed as

Protein ConformationCarbon-Sulfur LyasesCrystallography, X-RayDEAD-box RNA HelicasesEscherichia coliEscherichia coli ProteinsMolecular Dynamics SimulationOxidative StressProtein Interaction Domains and MotifsProtein MultimerizationSulfurCarbon-Sulfur Lyasescysteine desulfuraseDEAD-box RNA HelicasesdeaD protein, E coliEscherichia coli ProteinsSulfur

Identifiers

PMID29045454
PMCPMC5646864

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.