Evidence map›Paper›PMID 29044753›Full record

ArticleMagnetic resonance in medicine2018

Development of a quantitative intracranial vascular features extraction tool on 3D MRA using semiautomated open-curve active contour vessel tracing.

Li Chen, Mahmud Mossa-Basha, Niranjan Balu, Gador Canton, Jie Sun, Kristi Pimentel, Thomas S Hatsukami, Jenq-Neng Hwang, Chun Yuan

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Anatomically-guided masked autoencoder pre-training for aneurysm detection.IEEE Winter Conference on Applications of Computer Vision. IEEE Winter Conference on Applications of Computer Vision · 2026
    Article
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  3. Cerebrovascular morphology: Insights into normal variations, aging effects and disease implications.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2025
    Review
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  6. In Vivo Deformation of the Human Basilar Artery.Annals of biomedical engineering · 2025
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  16. Characterization of non-stenotic plaques in intracranial arteries with multi-contrast, multi-planar vessel wall image analysis.Journal of stroke and cerebrovascular diseases : the official journal of National Stroke Association · 2022
    Article
  17. Article
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  19. Novel imaging markers for altered cerebrovascular morphology in aging, stroke, and Alzheimer's disease.Journal of neuroimaging : official journal of the American Society of Neuroimaging · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Li ChenDepartment of Electrical Engineering, University of Washington, Seattle, Washington, USA.
Mahmud Mossa-BashaDepartment of Radiology, University of Washington, Seattle, Washington, USA.
Niranjan BaluDepartment of Radiology, University of Washington, Seattle, Washington, USA.
Gador CantonDepartment of Radiology, University of Washington, Seattle, Washington, USA.
Jie SunDepartment of Radiology, University of Washington, Seattle, Washington, USA.
Kristi PimentelDepartment of Radiology, University of Washington, Seattle, Washington, USA.
Thomas S HatsukamiDepartment of Surgery, University of Washington, Seattle, Washington, USA.
Jenq-Neng HwangDepartment of Electrical Engineering, University of Washington, Seattle, Washington, USA.
Chun YuanDepartment of Radiology, University of Washington, Seattle, Washington, USA.

Funding

Carotid Intraplaque Hemorrhage: MRI of Therapeutic Response and Clinical SequelaeR01HL103609 · NHLBI · UNIVERSITY OF WASHINGTON · PI HATSUKAMI, THOMAS, YUAN, CHUN · 2011 to 2021
$7.1M
3D WALLI: MR intracranial vessel wall imaging for stroke preventionR01NS092207 · NINDS · UNIVERSITY OF WASHINGTON · PI MOSSA-BASHA, MAHMUD, YUAN, CHUN · 2016 to 2019
$3.1M
3D WALLI: MR intracranial vessel wall imaging for stroke preventionR56NS092207 · NINDS · UNIVERSITY OF WASHINGTON · PI MOSSA-BASHA, MAHMUD, YUAN, CHUN · 2015 to 2015
$609k
Culprit Plaque in Acute Cerebral Infarction: A Histological and MRI AssessmentR01NS083503 · NINDS · UNIVERSITY OF WASHINGTON · PI HATSUKAMI, THOMAS · 2013 to 2015
$598k
NHLBI NIH HHS R01 HL103609NINDS NIH HHS R01 NS083503NINDS NIH HHS R01 NS092207NINDS NIH HHS R56 NS092207
6 · The paper itself

Abstract

purposeTo develop a quantitative intracranial artery measurement technique to extract comprehensive artery features from time-of-flight MR angiography (MRA).

methodsBy semiautomatically tracing arteries based on an open-curve active contour model in a graphical user interface, 12 basic morphometric features and 16 basic intensity features for each artery were identified. Arteries were then classified as one of 24 types using prediction from a probability model. Based on the anatomical structures, features were integrated within 34 vascular groups for regional features of vascular trees. Eight 3D MRA acquisitions with intracranial atherosclerosis were assessed to validate this technique.

resultsArterial tracings were validated by an experienced neuroradiologist who checked agreement at bifurcation and stenosis locations. This technique achieved 94% sensitivity and 85% positive predictive values (PPV) for bifurcations, and 85% sensitivity and PPV for stenosis. Up to 1,456 features, such as length, volume, and averaged signal intensity for each artery, as well as vascular group in each of the MRA images, could be extracted to comprehensively reflect characteristics, distribution, and connectivity of arteries. Length for the M1 segment of the middle cerebral artery extracted by this technique was compared with reviewer-measured results, and the intraclass correlation coefficient was 0.97.

conclusionA semiautomated quantitative method to trace, label, and measure intracranial arteries from 3D-MRA was developed and validated. This technique can be used to facilitate quantitative intracranial vascular research, such as studying cerebrovascular adaptation to aging and disease conditions. Magn Reson Med 79:3229-3238, 2018. © 2017 International Society for Magnetic Resonance in Medicine.

Indexed as

AdultAgedAlgorithmsCerebral ArteriesFemaleHumansImaging, Three-DimensionalIntracranial ArteriosclerosisMagnetic Resonance AngiographyMaleMiddle Agedfeature extractionintracranial arteryMR angiogramopen-curve active contourtime-of-flightvessel tracing

Identifiers

PMID29044753
PMCPMC5843519

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.