Evidence map›Paper›PMID 29044199›Full record

ArticleScientific reports2017

Fluorescence-coded DNA Nanostructure Probe System to Enable Discrimination of Tumor Heterogeneity via a Screening of Dual Intracellular microRNA Signatures in situ.

Seung Won Shin, Byoung Sang Lee, Kisuk Yang, Lunjakorn Amornkitbamrung, Min Su Jang, Bo Mi Ku, Seung-Woo Cho, Jung Heon Lee, Hojae Bae, Byung-Keun Oh and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Seung Won ShinSchool of Chemical Engineering, Sungkyunkwan University, Suwon, Gyeonggi-do, South Korea.
Byoung Sang LeeSchool of Advanced Materials Science and Engineering, Sungkyunkwan University, Suwon, Gyeonggi-do, South Korea.ORCID 0000-0001-9105-7085
Kisuk YangDepartment of Biotechnology, Yonsei University, Seoul, South Korea.
Lunjakorn AmornkitbamrungSchool of Chemical Engineering, Sungkyunkwan University, Suwon, Gyeonggi-do, South Korea.
Min Su JangSchool of Chemical Engineering, Sungkyunkwan University, Suwon, Gyeonggi-do, South Korea.
Bo Mi KuSamsung Biomedical Research Institute, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, South Korea.
Seung-Woo ChoDepartment of Biotechnology, Yonsei University, Seoul, South Korea.
Jung Heon LeeSchool of Advanced Materials Science and Engineering, Sungkyunkwan University, Suwon, Gyeonggi-do, South Korea.
Hojae BaeCollege of Animal Bioscience and Technology, Department of Bioindustrial Technologies, Konkuk University, Seoul, South Korea.
Byung-Keun OhDepartment of Chemical & Biomolecular Engineering, Sogang University, Seoul, South Korea.
Myung-Ju AhnSamsung Biomedical Research Institute, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, South Korea.
Yong Taik LimSchool of Chemical Engineering, Sungkyunkwan University, Suwon, Gyeonggi-do, South Korea.
Soong Ho UmSchool of Chemical Engineering, Sungkyunkwan University, Suwon, Gyeonggi-do, South Korea. sh.um@skku.edu.ORCID 0000-0002-2910-5629
Sungkyunkwan University · KRSamsung Medical Center · KRYonsei University · KRKonkuk University · KRSogang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Since the delivery kinetics of different cell types are different, the signal from the target cell is greatly affected by the noise signal of the diagnostic system. This is a major obstacle hindering the practical application of intracellular diagnostic systems, such as tumor heterogeneity. To address these issues, here we present a microRNA detection platform using fluorescence-encoded nanostructured DNA-based probes. The nanostructured DNA was designed to include molecular beacons for detecting cytosolic microRNA as well as additional fluorophores. When the intracellular diagnostic system is delivered, fluorescence signals are generated by the molecular beacons, depending on the concentration of the target microRNA. The fluorescence signals are then normalized to the intensity of the additional fluorophore. Through this simple calculation, the concentration of intracellular microRNA can be determined without interference from the diagnosis system itself. And also it enabled discrimination of microRNA expression heterogeneity in five different breast cancer cell lines.

Indexed as

Biomarkers, TumorBiosensing TechniquesDNAFluorescent DyesGenetic HeterogeneityHumansMCF-7 CellsMicroRNAsNanostructuresBiomarkers, TumorDNAFluorescent DyesMicroRNAs

Identifiers

PMID29044199
PMCPMC5647416
OpenAlexW2763502148

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.