Evidence map›Paper›PMID 29043008›Full record

ArticleGenes & nutrition2017

Ancestors' dietary patterns and environments could drive positive selection in genes involved in micronutrient metabolism-the case of cofactor transporters.

Silvia Parolo, Sébastien Lacroix, Jim Kaput, Marie-Pier Scott-Boyer

Open access · goldAbstract read
In one paragraph

Article in Genes & nutrition, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Genome-wide variation patterns between landraces and cultivars uncover divergent selection during modern wheat breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  6. Article
  7. DownstreamJournal of neurotrauma · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Silvia Parolo *The Microsoft Research, University of Trento Centre for Computational Systems Biology (COSBI), piazza Manifattura 1, 38068 Rovereto, TN Italy.
Sébastien Lacroix *The Microsoft Research, University of Trento Centre for Computational Systems Biology (COSBI), piazza Manifattura 1, 38068 Rovereto, TN Italy.
Jim KaputVydiant, Inc, Gold River, CA USA.
Marie-Pier Scott-BoyerThe Microsoft Research, University of Trento Centre for Computational Systems Biology (COSBI), piazza Manifattura 1, 38068 Rovereto, TN Italy.
The Microsoft Research - University of Trento Centre for Computational and Systems Biology · ITUniversity of Trento · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDuring evolution, humans colonized different ecological niches and adopted a variety of subsistence strategies that gave rise to diverse selective pressures acting across the genome. Environmentally induced selection of vitamin, mineral, or other cofactor transporters could influence micronutrient-requiring molecular reactions and contribute to inter-individual variability in response to foods and nutritional interventions.

methodsA comprehensive list of genes coding for transporters of cofactors or their precursors was built using data mining procedures from the HGDP dataset and then explored to detect evidence of positive genetic selection. This dataset was chosen since it comprises several genetically diverse worldwide populations whom ancestries have evolved in different environments and thus lived following various nutritional habits and lifestyles.

resultsWe identified 312 cofactor transporter (CT) genes involved in between-cell or sub-cellular compartment distribution of 28 cofactors derived from dietary intake. Twenty-four SNPs distributed across 14 CT genes separated populations into continental and intra-continental groups such as African hunter-gatherers and farmers, and between Native American sub-populations. Notably, four SNPs were located in

conclusionsThese findings could support the importance of considering individual's genetic makeup along with their metabolic profile when tailoring personalized dietary interventions for optimizing health.

Indexed as

AncestryBiological responseCofactor transportDietary habitsInter-individual variabilityPositive selection

Identifiers

PMID29043008
PMCPMC5628472
OpenAlexW2762076749

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.