Evidence map›Paper›PMID 29042596›Full record

ArticleScientific reports2017

Host heterozygosity and genotype rarity affect viral dynamics in an avian subspecies complex.

Justin R Eastwood, Raoul F H Ribot, Lee Ann Rollins, Katherine L Buchanan, Ken Walder, Andrew T D Bennett, Mathew L Berg

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 27 citations in OpenAlex.

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  12. Extreme Competence: Keystone Hosts of Infections.Trends in ecology & evolution · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Justin R EastwoodCentre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Geelong, 3216, Victoria, Australia. justin.eastwood@monash.edu.
Raoul F H RibotCentre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Geelong, 3216, Victoria, Australia.
Lee Ann RollinsCentre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Geelong, 3216, Victoria, Australia.
Katherine L BuchananCentre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Geelong, 3216, Victoria, Australia.
Ken WalderMetabolic Research Unit, School of Medicine, Deakin University, Geelong, 3216, Victoria, Australia.
Andrew T D BennettCentre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Geelong, 3216, Victoria, Australia.
Mathew L BergCentre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Geelong, 3216, Victoria, Australia.
Deakin University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic diversity at community, population and individual levels is thought to influence the spread of infectious disease. At the individual level, inbreeding and heterozygosity are associated with increased risk of infection and disease severity. Host genotype rarity may also reduce infection risk if pathogens are co-adapted to common or local hosts, but to date, no studies have investigated the relative importance of genotype rarity and heterozygosity for infection in a wild, sexually reproducing vertebrate. With beak and feather disease virus (BFDV) infection in a wild parrot (Platycercus elegans), we show that both heterozygosity and genotype rarity of individual hosts predicted infection, but in contrasting ways. Heterozygosity was negatively associated with probability of infection, but not with infection load. In contrast, increased host genotype rarity was associated with lower viral load in infected individuals, but did not predict infection probability. These effects were largely consistent across subspecies, but were not evident at the population level. Subspecies and age were also strongly associated with infection. Our study provides novel insights into infection dynamics by quantifying rarity and diversity simultaneously. We elucidate roles that host genetic diversity can play in infection dynamics, with implications for understanding population divergence, intraspecific diversity and conservation.

Indexed as

Gene FrequencyHeterozygoteAnimalsBird DiseasesCircoviridae InfectionsCircovirusParrotsPolymorphism, GeneticViral Load

Identifiers

PMID29042596
PMCPMC5645371
OpenAlexW2764130197

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.