Evidence map›Paper›PMID 29042512›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

In vitro reconstitution of T cell receptor-mediated segregation of the CD45 phosphatase.

Catherine B Carbone, Nadja Kern, Ricardo A Fernandes, Enfu Hui, Xiaolei Su, K Christopher Garcia, Ronald D Vale

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 101 citations in OpenAlex.

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  12. T-cell virtuosity in ''knowing thyself".Frontiers in immunology · 2024
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. ACS chemical biology · 2022
    Article
  19. Article
  20. Trapping or slowing the diffusion of T cell receptors at close contacts initiates T cell signaling.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Catherine B CarboneDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, CA 94158.
Nadja KernDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, CA 94158.ORCID 0000-0002-1313-5890
Ricardo A FernandesDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305.
Enfu HuiDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, CA 94158.
Xiaolei SuDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, CA 94158.
K Christopher GarciaDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305.
Ronald D ValeDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, CA 94158; ron.vale@ucsf.edu.
Marine Biological Laboratory · USHoward Hughes Medical Institute · US

Funding

STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008284 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KORTEMME, TANJA · 1988 to 2022
$10.1M
Open Source Microscopy SoftwareR01EB007187 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI VALE, RONALD D · 2008 to 2014
$2.8M
Howard Hughes Medical InstituteNIBIB NIH HHS R01 EB007187
6 · The paper itself

Abstract

T cell signaling initiates upon the binding of peptide-loaded MHC (pMHC) on an antigen-presenting cell to the T cell receptor (TCR) on a T cell. TCR phosphorylation in response to pMHC binding is accompanied by segregation of the transmembrane phosphatase CD45 away from TCR-pMHC complexes. The kinetic segregation hypothesis proposes that CD45 exclusion shifts the local kinase-phosphatase balance to favor TCR phosphorylation. Spatial partitioning may arise from the size difference between the large CD45 extracellular domain and the smaller TCR-pMHC complex, although parsing potential contributions of extracellular protein size, actin activity, and lipid domains is difficult in living cells. Here, we reconstitute segregation of CD45 from bound receptor-ligand pairs using purified proteins on model membranes. Using a model receptor-ligand pair (FRB-FKBP), we first test physical and computational predictions for protein organization at membrane interfaces. We then show that the TCR-pMHC interaction causes partial exclusion of CD45. Comparing two developmentally regulated isoforms of CD45, the larger R

Indexed as

AnimalsAntigen-Presenting CellsB7-H1 AntigenCell LineCell MembraneHumansKineticsLeukocyte Common AntigensLigandsLymphocyte ActivationPhosphoric Monoester HydrolasesPhosphorylationProgrammed Cell Death 1 ReceptorProtein BindingReceptors, Antigen, T-CellSf9 CellsB7-H1 AntigenLeukocyte Common AntigensLigandsPhosphoric Monoester HydrolasesProgrammed Cell Death 1 ReceptorPTPRC protein, humanReceptors, Antigen, T-CellCD45kinetic segregationPD-1signalingTCR

Identifiers

PMID29042512
PMCPMC5676914
OpenAlexW2950626582

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.