Evidence map›Paper›PMID 29042504›Full record

ArticlemBio2017

Unintended Laboratory-Driven Evolution Reveals Genetic Requirements for Biofilm Formation by

Kara B De León, Grant M Zane, Valentine V Trotter, Gregory P Krantz, Adam P Arkin, Gareth P Butland, Peter J Walian, Matthew W Fields, Judy D Wall

Open access · goldAbstract read
In one paragraph

Article in mBio, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Anti-Biofilm Effects of Z102-E ofFoods (Basel, Switzerland) · 2024
    Article
  5. Reconstitution of a biofilm adhesin system from a sulfate-reducing bacterium inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. HmBio · 2023
    Article
  8. Article
  9. Article
  10. Review
  11. Novel Mode of Molybdate Inhibition ofFrontiers in microbiology · 2020
    Article
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Kara B De LeónDepartment of Biochemistry, University of Missouri, Columbia, Missouri, USA.ORCID 0000-0002-2499-5650
Grant M ZaneDepartment of Biochemistry, University of Missouri, Columbia, Missouri, USA.ORCID 0000-0002-3357-3097
Valentine V TrotterEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Gregory P KrantzDepartment of Microbiology and Immunology, Montana State University, Bozeman, Montana, USA.
Adam P ArkinEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Gareth P ButlandEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Peter J WalianMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.ORCID 0000-0001-7405-902X
Matthew W FieldsDepartment of Microbiology and Immunology, Montana State University, Bozeman, Montana, USA.ORCID 0000-0001-9053-1849
Judy D WallDepartment of Biochemistry, University of Missouri, Columbia, Missouri, USA wallj@missouri.edu.
Lawrence Berkeley National Laboratory · USUniversity of Missouri · USMontana State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biofilms of sulfate-reducing bacteria (SRB) are of particular interest as members of this group are culprits in corrosion of industrial metal and concrete pipelines as well as being key players in subsurface metal cycling. Yet the mechanism of biofilm formation by these bacteria has not been determined. Here we show that two supposedly identical wild-type cultures of the SRB

Indexed as

Directed Molecular EvolutionATP-Binding Cassette TransportersBacterial ProteinsBiofilmsDesulfovibrio vulgarisDNA Mutational AnalysisGenome, BacterialMutant ProteinsPoint MutationWhole Genome SequencingATP-Binding Cassette TransportersBacterial ProteinsMutant ProteinsbiofilmsDesulfovibrio vulgarisgenetic polymorphismssecretion systemssulfate reduction

Identifiers

PMID29042504
PMCPMC5646257
OpenAlexW2765481029

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.