ArticleNucleic acids research2018
DNA Data Bank of Japan: 30th anniversary.
Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed.
- Ruminant microbiome data are skewed and unFAIR, undermining their usefulness for sustainable production improvement.Animal microbiome · 2024Article
- A common transcriptional mechanism involving R-loop and RNA abasic site regulates an enhancer RNA of APOE.Nucleic acids research · 2022Article
- Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space.Cell genomics · 2022Article
- ADDAGMA: A database for domestic animal gut microbiome atlas.Computational and structural biotechnology journal · 2022Article
- Biomolecule and Bioentity Interaction Databases in Systems Biology: A Comprehensive Review.Biomolecules · 2021Review
- Integrating Systems and Synthetic Biology to Understand and Engineer Microbiomes.Annual review of biomedical engineering · 2021Review
- The European Nucleotide Archive in 2020.Nucleic acids research · 2021Article
- Review on the Computational Genome Annotation of Sequences Obtained by Next-Generation Sequencing.Biology · 2020Review
- CNSA: a data repository for archiving omics data.Database : the journal of biological databases and curation · 2020Article
- Bringing radiomics into a multi-omics framework for a comprehensive genotype-phenotype characterization of oncological diseases.Journal of translational medicine · 2019Review
- GenBank.Nucleic acids research · 2019Article
- DDBJ update: the Genomic Expression Archive (GEA) for functional genomics data.Nucleic acids research · 2019Article
- The European Nucleotide Archive in 2018.Nucleic acids research · 2019Article
- Database resources of the National Center for Biotechnology Information.Nucleic acids research · 2019Article
- BioSamples database: an updated sample metadata hub.Nucleic acids research · 2019Article
- COXPRESdb v7: a gene coexpression database for 11 animal species supported by 23 coexpression platforms for technical evaluation and evolutionary inference.Nucleic acids research · 2019Article
- RPFdb v2.0: an updated database for genome-wide information of translated mRNA generated from ribosome profiling.Nucleic acids research · 2019Article
- Review
- EMBL2checklists: A Python package to facilitate the user-friendly submission of plant and fungal DNA barcoding sequences to ENA.PloS one · 2019Article
- New species of bone-eating wormZooKeys · 2019Article
Corrections and comments
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Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The DNA Data Bank of Japan (DDBJ) Center (http://www.ddbj.nig.ac.jp) has been providing public data services for 30 years since 1987. We are collecting nucleotide sequence data and associated biological information from researchers as a member of the International Nucleotide Sequence Database Collaboration (INSDC), in collaboration with the US National Center for Biotechnology Information and the European Bioinformatics Institute. The DDBJ Center also services the Japanese Genotype-phenotype Archive (JGA) with the National Bioscience Database Center to collect genotype and phenotype data of human individuals. Here, we outline our database activities for INSDC and JGA over the past year, and introduce submission, retrieval and analysis services running on our supercomputer system and their recent developments. Furthermore, we highlight our responses to the amended Japanese rules for the protection of personal information and the launch of the DDBJ Group Cloud service for sharing pre-publication data among research groups.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.