Evidence map›Paper›PMID 29039919›Full record

ArticleJournal of the American Chemical Society2017

The Molecular Tweezer CLR01 Stabilizes a Disordered Protein-Protein Interface.

David Bier, Sumit Mittal, Kenny Bravo-Rodriguez, Andrea Sowislok, Xavier Guillory, Jeroen Briels, Christian Heid, Maria Bartel, Burkhard Wettig, Luc Brunsveld and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Protein Recognition and Assembly by a Phosphocavitand.Journal of the American Chemical Society · 2025
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  4. Review
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  9. From sequence to function through structure: Deep learning for protein design.Computational and structural biotechnology journal · 2023
    Review
  10. Article
  11. Article
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  14. Review
  15. A new soaking procedure for X-ray crystallographic structural determination of protein-peptide complexes.Acta crystallographica. Section F, Structural biology communications · 2020
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

David BierLaboratory of Chemical Biology, Department of Biomedical Engineering and Institute for Complex Molecular Systems, Eindhoven University of Technology , Den Dolech 2, 5612 AZ Eindhoven, The Netherlands.
Sumit MittalMax-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany.
Kenny Bravo-RodriguezMax-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany.
Andrea SowislokDepartment of Chemistry, University of Duisburg-Essen , Universitätsstrasse 7, 45117 Essen, Germany.
Xavier GuilloryLaboratory of Chemical Biology, Department of Biomedical Engineering and Institute for Complex Molecular Systems, Eindhoven University of Technology , Den Dolech 2, 5612 AZ Eindhoven, The Netherlands.
Jeroen BrielsLaboratory of Chemical Biology, Department of Biomedical Engineering and Institute for Complex Molecular Systems, Eindhoven University of Technology , Den Dolech 2, 5612 AZ Eindhoven, The Netherlands.
Christian HeidDepartment of Chemistry, University of Duisburg-Essen , Universitätsstrasse 7, 45117 Essen, Germany.
Maria BartelLaboratory of Chemical Biology, Department of Biomedical Engineering and Institute for Complex Molecular Systems, Eindhoven University of Technology , Den Dolech 2, 5612 AZ Eindhoven, The Netherlands.
Burkhard WettigDepartment of Chemistry, University of Duisburg-Essen , Universitätsstrasse 7, 45117 Essen, Germany.
Luc BrunsveldLaboratory of Chemical Biology, Department of Biomedical Engineering and Institute for Complex Molecular Systems, Eindhoven University of Technology , Den Dolech 2, 5612 AZ Eindhoven, The Netherlands.ORCID 0000-0001-5675-511X
Elsa Sanchez-GarciaMax-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany.ORCID 0000-0002-9211-5803
Thomas SchraderDepartment of Chemistry, University of Duisburg-Essen , Universitätsstrasse 7, 45117 Essen, Germany.ORCID 0000-0002-7003-6362
Christian OttmannLaboratory of Chemical Biology, Department of Biomedical Engineering and Institute for Complex Molecular Systems, Eindhoven University of Technology , Den Dolech 2, 5612 AZ Eindhoven, The Netherlands.ORCID 0000-0001-7315-0315
University of Duisburg-Essen · DEMax-Planck-Institut für Kohlenforschung · DEEindhoven University of Technology · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein regions that are involved in protein-protein interactions (PPIs) very often display a high degree of intrinsic disorder, which is reduced during the recognition process. A prime example is binding of the rigid 14-3-3 adapter proteins to their numerous partner proteins, whose recognition motifs undergo an extensive disorder-to-order transition. In this context, it is highly desirable to control this entropy-costly process using tailored stabilizing agents. This study reveals how the molecular tweezer CLR01 tunes the 14-3-3/Cdc25CpS216 protein-protein interaction. Protein crystallography, biophysical affinity determination and biomolecular simulations unanimously deliver a remarkable finding: a supramolecular "Janus" ligand can bind simultaneously to a flexible peptidic PPI recognition motif and to a well-structured adapter protein. This binding fills a gap in the protein-protein interface, "freezes" one of the conformational states of the intrinsically disordered Cdc25C protein partner and enhances the apparent affinity of the interaction. This is the first structural and functional proof of a supramolecular ligand targeting a PPI interface and stabilizing the binding of an intrinsically disordered recognition motif to a rigid partner protein.

Indexed as

EntropyLigands14-3-3 ProteinsAmino Acid MotifsBinding Sitescdc25 PhosphatasesIntrinsically Disordered ProteinsModels, MolecularPeptidesProtein BindingProtein ConformationProtein Stability14-3-3 Proteinscdc25 PhosphatasesIntrinsically Disordered ProteinsLigandsPeptides

Identifiers

PMID29039919
PMCPMC5691318
OpenAlexW2766684546

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.