Evidence map›Paper›PMID 29038488›Full record

ArticleScientific reports2017

MCM2-regulated functional networks in lung cancer by multi-dimensional proteomic approach.

Chantal Hoi Yin Cheung, Chia-Lang Hsu, Kai-Pu Chen, Siao-Ting Chong, Chang-Hsun Wu, Hsuan-Cheng Huang, Hsueh-Fen Juan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Chantal Hoi Yin CheungInstitute of Molecular and Cellular Biology, National Taiwan University, Taipei, 10617, Taiwan.
Chia-Lang HsuDepartment of Life Science, National Taiwan University, Taipei, 10617, Taiwan.ORCID 0000-0002-7447-8045
Kai-Pu ChenGraduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, 10617, Taiwan.
Siao-Ting ChongInstitute of Molecular and Cellular Biology, National Taiwan University, Taipei, 10617, Taiwan.
Chang-Hsun WuDepartment of Life Science, National Taiwan University, Taipei, 10617, Taiwan.
Hsuan-Cheng HuangInstitute of Biomedical Informatics, Center for Systems and Synthetic Biology, National Yang-Ming University, Taipei, 11221, Taiwan. hsuancheng@ym.edu.tw.
Hsueh-Fen JuanInstitute of Molecular and Cellular Biology, National Taiwan University, Taipei, 10617, Taiwan. yukijuan@ntu.edu.tw.ORCID 0000-0003-4876-3309
National Taiwan University · TWNational Yang Ming Chiao Tung University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA replication control is vital for maintaining genome stability and the cell cycle, perhaps most notably during cell division. Malignancies often exhibit defective minichromosome maintenance protein 2 (MCM2), a cancer proliferation biomarker that serves as a licensing factor in the initiation of DNA replication. MCM2 is also known to be one of the ATPase active sites that facilitates conformational changes and drives DNA unwinding at the origin of DNA replication. However, the biological networks of MCM2 in lung cancer cells via protein phosphorylation remain unmapped. The RNA-seq datasets from The Cancer Genome Atlas (TCGA) revealed that MCM2 overexpression is correlated with poor survival rate in lung cancer patients. To uncover MCM2-regulated functional networks in lung cancer, we performed multi-dimensional proteomic approach by integrating analysis of the phosphoproteome and proteome, and identified a total of 2361 phosphorylation sites on 753 phosphoproteins, and 4672 proteins. We found that the deregulation of MCM2 is involved in lung cancer cell proliferation, the cell cycle, and migration. Furthermore, HMGA1

Indexed as

ProteomeProteomicsCell CycleCell Line, TumorCell MovementCell ProliferationChromatography, LiquidComputational BiologyGene ExpressionHumansLung NeoplasmsMinichromosome Maintenance Complex Component 2Models, BiologicalPhosphopeptidesPhosphoproteinsPhosphorylationMCM2 protein, humanMinichromosome Maintenance Complex Component 2PhosphopeptidesPhosphoproteinsProteome

Identifiers

PMID29038488
PMCPMC5643318
OpenAlexW2763791353

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.