Evidence map›Paper›PMID 29038012›Full record

ArticleJournal of structural biology2017

The structure of the actin-smooth muscle myosin motor domain complex in the rigor state.

Chaity Banerjee, Zhongjun Hu, Zhong Huang, J Anthony Warrington, Dianne W Taylor, Kathleen M Trybus, Susan Lowey, Kenneth A Taylor

Open access · greenAbstract read
In one paragraph

Article in Journal of structural biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Chaity BanerjeeDepartment of Computer Science, Florida State University, Tallahassee, FL 32306-4530, United States.
Zhongjun HuInstitute of Molecular Biophysics, Kasha Laboratory, Florida State University, Tallahassee, FL 32306-4380, United States.
Zhong HuangInstitute of Molecular Biophysics, Kasha Laboratory, Florida State University, Tallahassee, FL 32306-4380, United States.
J Anthony WarringtonInstitute of Molecular Biophysics, Kasha Laboratory, Florida State University, Tallahassee, FL 32306-4380, United States.
Dianne W TaylorInstitute of Molecular Biophysics, Kasha Laboratory, Florida State University, Tallahassee, FL 32306-4380, United States.
Kathleen M TrybusHealth Science Research Facility 130, 149 Beaumont Avenue, Department of Molecular Physiology & Biophysics, University of Vermont, Burlington, VT 05405, United States.
Susan LoweyHealth Science Research Facility 130, 149 Beaumont Avenue, Department of Molecular Physiology & Biophysics, University of Vermont, Burlington, VT 05405, United States.
Kenneth A TaylorInstitute of Molecular Biophysics, Kasha Laboratory, Florida State University, Tallahassee, FL 32306-4380, United States. Electronic address: taylor@bio.fsu.edu.
Florida State University · USUniversity of Vermont · US

Funding

Pathology and Molecular Imaging CoreP01HL110869 · NHLBI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MILEWICZ, DIANNA M · 2012 to 2016
$10.4M
EM STUDIES ON MUSCLER01GM030598 · NIGMS · FLORIDA STATE UNIVERSITY · PI TAYLOR, KENNETH ALLEN · 1985 to 2020
$4.9M
Purchase of a FEI Titan Krios for 3-D EMS10RR025080 · NCRR · FLORIDA STATE UNIVERSITY · PI TAYLOR, KENNETH ALLEN · 2008 to 2008
$2.0M
MYOSIN DOMAIN INTERACTIONS DURING THE CONTRACTILE CYCLER01AR053975 · NIAMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI LOWEY, SUSAN · 2007 to 2011
$1.9M
Purchase of a direct electron camera for the Titan-Krios at FSUS10OD018142 · OD · FLORIDA STATE UNIVERSITY · PI TAYLOR, KENNETH ALLEN · 2014 to 2014
$384k
NCRR NIH HHS S10 RR025080NHLBI NIH HHS P01 HL110869NIAMS NIH HHS R01 AR053975NIGMS NIH HHS R01 GM030598NIH HHS S10 OD018142
6 · The paper itself

Abstract

Myosin-based motility utilizes catalysis of ATP to drive the relative sliding of F-actin and myosin. The earliest detailed model based on cryo-electron microscopy (cryoEM) and X-ray crystallography postulated that higher actin affinity and lever arm movement were coupled to closure of a feature of the myosin head dubbed the actin-binding cleft. Several studies since then using crystallography of myosin-V and cryoEM structures of F-actin bound myosin-I, -II and -V have provided details of this model. The smooth muscle myosin II interaction with F-actin may differ from those for striated and non-muscle myosin II due in part to different lengths of important surface loops. Here we report a ∼6 Å resolution reconstruction of F-actin decorated with the nucleotide-free recombinant smooth muscle myosin-II motor domain (MD) from images recorded using a direct electron detector. Resolution is highest for F-actin and the actin-myosin interface (3.5-4 Å) and lowest (∼6-7 Å) for those parts of the MD at the highest radius. Atomic models built into the F-actin density are quite comparable to those previously reported for rabbit muscle actin and show density from the bound ADP. The atomic model of the MD, is quite similar to a recently published structure of vertebrate non-muscle myosin II bound to F-actin and a crystal structure of nucleotide free myosin-V. Larger differences are observed when compared to the cryoEM structure of F-actin decorated with rabbit skeletal muscle myosin subfragment 1. The differences suggest less closure of the 50 kDa domain in the actin bound skeletal muscle myosin structure.

Indexed as

ActinsAnimalsCryoelectron MicroscopyImaging, Three-DimensionalModels, MolecularMultiprotein ComplexesProtein ConformationProtein DomainsSmooth Muscle MyosinsActinsMultiprotein ComplexesSmooth Muscle MyosinsATPaseElectron microscopyMolecular motorSingle particle

Identifiers

PMID29038012
PMCPMC5748330
OpenAlexW2761693679

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.