Evidence map›Paper›PMID 29036562›Full record

ArticleBioinformatics (Oxford, England)2017

nandb-number and brightness in R with a novel automatic detrending algorithm.

Rory Nolan, Luis A J Alvarez, Jonathan Elegheert, Maro Iliopoulou, G Maria Jakobsdottir, Marina Rodriguez-Muñoz, A Radu Aricescu, Sergi Padilla-Parra

Abstract read
In one paragraph

Article in Bioinformatics (Oxford, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Rory NolanWellcome Trust Centre for Human Genetics.
Luis A J AlvarezWellcome Trust Centre for Human Genetics.
Jonathan ElegheertDepartment of Structural Biology, University of Oxford, Oxford OX3 7BN, UK.
Maro IliopoulouWellcome Trust Centre for Human Genetics.
G Maria JakobsdottirWellcome Trust Centre for Human Genetics.
Marina Rodriguez-MuñozWellcome Trust Centre for Human Genetics.
A Radu AricescuDepartment of Structural Biology, University of Oxford, Oxford OX3 7BN, UK.
Sergi Padilla-ParraWellcome Trust Centre for Human Genetics.

Funding

Medical Research Council MC_EX_MR/L009609/2Medical Research Council MC_UP_1201/15Medical Research Council MR/L009609/1Wellcome Trust 105278Wellcome Trust 203141
6 · The paper itself

Abstract

summaryAn R package for performing number and brightness image analysis, with the implementation of a novel automatic detrending algorithm. AVAILABILITY AND IMPLEMENTATION: Available at https://github.com/rorynolan/nandb for all platforms. CONTACT: rnolan@well.ox.ac.uk or spadilla@well.ox.ac.uk. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

Indexed as

AlgorithmsSoftwareAnimalsChlorocebus aethiopsCOS CellsHumansImage Processing, Computer-Assisted

Identifiers

PMID29036562
PMCPMC5860167

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.