Evidence map›Paper›PMID 29035735›Full record

ArticleInternational journal for parasitology. Drugs and drug resistance2017

Transcriptome profiling identifies genes/pathways associated with experimental resistance to paromomycin in Leishmania donovani.

Aditya Verma, Vasundhra Bhandari, Deepak Kumar Deep, Shyam Sundar, Jean Claude Dujardin, Ruchi Singh, Poonam Salotra

Open access · goldAbstract read
In one paragraph

Article in International journal for parasitology. Drugs and drug resistance, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Molecular Mechanisms of Drug Resistance inPathogens (Basel, Switzerland) · 2024
    Review
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  9. Involvement ofFrontiers in cellular and infection microbiology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Aditya VermaICMR-National Institute of Pathology, Safdarjung Hospital Campus, New Delhi, India; Symbiosis School of Biomedical Sciences, Symbiosis International University, Pune, India.
Vasundhra BhandariICMR-National Institute of Pathology, Safdarjung Hospital Campus, New Delhi, India.
Deepak Kumar DeepICMR-National Institute of Pathology, Safdarjung Hospital Campus, New Delhi, India.
Shyam SundarInstitute of Medical Sciences, Banaras Hindu University, Varanasi, India.
Jean Claude DujardinUnit of Molecular Parasitology, Department of Parasitology, Institute of Tropical Medicine, Antwerp, Belgium.
Ruchi SinghICMR-National Institute of Pathology, Safdarjung Hospital Campus, New Delhi, India.
Poonam SalotraICMR-National Institute of Pathology, Safdarjung Hospital Campus, New Delhi, India. Electronic address: salotra@vsnl.com.
Safdarjang Hospital · INInstitute of Medical Sciences · INInstituut voor Tropische Geneeskunde · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Widespread resistance towards antimony and reports of relapses following miltefosine treatment has severely affected the management of visceral leishmaniasis (VL) in the Indian subcontinent. Paromomycin (PMM), an aminoglycoside antibiotic, has been licensed for VL treatment in India in 2007. Although its use is still restricted in the field, unraveling the molecular mechanism of resistance towards PMM is the key to preserve the drug. In this study, PMM resistant lines were selected up to 100 μM of PMM in three distinct field isolates of Leishmania donovani at promastigote stage. The resistance induced at promastigote level was also evident in amastigotes which showed 6 fold decreases in PMM susceptibility. Comparative transcriptome profiling of PMM resistant (PMM-R) and the corresponding PMM sensitive (PMM-S) parasites revealed modulated expression of 500 genes (1.5 fold cut off) in PMM-R parasites. Selected genes were validated for their modulated expression by quantitative real-time PCR. Functional classification and pathway analysis of modulated genes indicated probable adaptations in drug resistant lines which included a) reduced oxidative phosphorylation; b) increased glycosomal succinate fermentation and substrate level phosphorylation; c) dependency on lipids and amino acids for energy generation; d) reduced DNA synthesis and increased DNA damage repair and e) decreased protein synthesis and degradation. Interestingly, PMM-R parasites showed a marked increase in PMM susceptibility in presence of verapamil and amlodipine, antagonists of Ca

Indexed as

Gene Expression ProfilingAmlodipineAnimalsAnti-Bacterial AgentsAntimonyAntiprotozoal AgentsATP-Binding Cassette TransportersDrug ResistanceHumansLeishmania donovaniLeishmaniasis, VisceralLife Cycle StagesMacrophagesMetabolic Networks and PathwaysMiceNitric OxideAmlodipineAnti-Bacterial AgentsAntimonyAntiprotozoal AgentsATP-Binding Cassette TransportersNitric OxideParomomycinReactive Oxygen SpeciesVerapamilABC transportersDrug resistanceLeishmania donovaniNitric oxideParomomycinTranscriptomeVisceral leishmaniasis

Identifiers

PMID29035735
PMCPMC5645162
OpenAlexW2762417051

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.