Evidence map›Paper›PMID 29030554›Full record

ArticleNature communications2017

HDX reveals the conformational dynamics of DNA sequence specific VDR co-activator interactions.

Jie Zheng, Mi Ra Chang, Ryan E Stites, Yong Wang, John B Bruning, Bruce D Pascal, Scott J Novick, Ruben D Garcia-Ordonez, Keith R Stayrook, Michael J Chalmers and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  6. Structure and the Anticancer Activity of Vitamin D Receptor Agonists.International journal of molecular sciences · 2024
    Review
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  9. Mobile barrier mechanisms for NabioRxiv : the preprint server for biology · 2023
    Article
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  13. Review
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  15. Review
  16. Article
  17. Article
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  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Jie ZhengDepartment of Molecular Medicine, The Scripps Research Institute, Jupiter, FL, 33458, USA.
Mi Ra ChangDepartment of Molecular Medicine, The Scripps Research Institute, Jupiter, FL, 33458, USA.
Ryan E StitesLilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, 46225, USA.
Yong WangLilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, 46225, USA.
John B BruningThe University of Adelaide, Institute for Photonics & Advanced Sensing (IPAS), School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia.
Bruce D PascalDepartment of Molecular Medicine, The Scripps Research Institute, Jupiter, FL, 33458, USA.
Scott J NovickDepartment of Molecular Medicine, The Scripps Research Institute, Jupiter, FL, 33458, USA.
Ruben D Garcia-OrdonezDepartment of Molecular Medicine, The Scripps Research Institute, Jupiter, FL, 33458, USA.
Keith R StayrookLilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, 46225, USA.
Michael J ChalmersLilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, 46225, USA.
Jeffrey A DodgeLilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, 46225, USA.
Patrick R GriffinDepartment of Molecular Medicine, The Scripps Research Institute, Jupiter, FL, 33458, USA. pgriffin@scripps.edu.
Scripps Research Institute · USEli Lilly (United States) · USUniversity of Adelaide · AU

Funding

Acquisition of a LTQ/Orbitrap MS to advance the study of protein dynamicsS10RR027270 · NCRR · SCRIPPS RESEARCH INSTITUTE, THE · PI GRIFFIN, PATRICK ROBERT · 2010 to 2010
$500k
NCRR NIH HHS S10 RR027270
6 · The paper itself

Abstract

The vitamin D receptor/retinoid X receptor-α heterodimer (VDRRXRα) regulates bone mineralization via transcriptional control of osteocalcin (BGLAP) gene and is the receptor for 1α,25-dihydroxyvitamin D

Indexed as

Deuterium Exchange MeasurementDimerizationDNAHumansHydrogenLigandsMass SpectrometryOsteocalcinProtein BindingReceptors, CalcitriolRetinoid X ReceptorsVitamin Ddihydroxy-vitamin D3DNAHydrogenLigandsOsteocalcinReceptors, CalcitriolRetinoid X ReceptorsVitamin D

Identifiers

PMID29030554
PMCPMC5640644
OpenAlexW2761685094

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.