Evidence map›Paper›PMID 29029607›Full record

ArticleBMC genomics2017

miRNAs involved in the development and differentiation of fertile and sterile flowers in Viburnum macrocephalum f. keteleeri.

Weixing Li, Zhichong He, Li Zhang, Zhaogeng Lu, Jing Xu, Jiawen Cui, Li Wang, Biao Jin

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Weixing LiCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Zhichong HeCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Li ZhangCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Zhaogeng LuCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Jing XuCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Jiawen CuiCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Li WangCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Biao JinCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China. bjin@yzu.edu.cn.ORCID http://orcid.org/0000-0002-7330-334X
Yangzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSterile and fertile flowers are important evolutionary developmental phenotypes in angiosperm flowers. The development of floral organs, critical in angiosperm reproduction, is regulated by microRNAs (miRNAs). However, the mechanisms underpinning the miRNA regulation of the differentiation and development of sterile and fertile flowers remain unclear.

resultsHere, based on investigations of the morphological differences between fertile and sterile flowers, we used high-throughput sequencing to characterize the miRNAs in the differentiated floral organs of Viburnum macrocephalum f. keteleeri. We identified 49 known miRNAs and 67 novel miRNAs by small RNA (sRNA) sequencing and bioinformatics analysis, and 17 of these known and novel miRNA precursors were validated by polymerase chain reaction (PCR) and Sanger sequencing. Furthermore, by comparing the sequencing results of two sRNA libraries, we found that 30 known and 39 novel miRNA sequences were differentially expressed, and 35 were upregulated and 34 downregulated in sterile compared with fertile flowers. Combined with their predicted targets, the potential roles of miRNAs in V. macrocephalum f. keteleeri flowers include involvement in floral organogenesis, cell proliferation, hormonal pathways, and stress responses. miRNA precursors and targets were further validated by quantitative real-time PCR (qRT-PCR). Specifically, miR156a-5p, miR156g, and miR156j expression levels were significantly higher in fertile flowers than in sterile flowers, while SPL genes displayed the opposite expression pattern. Considering that the targets of miR156 are predicted to be SPL genes, we propose that miR156 may be involved in the regulation of stamen development in V. macrocephalum f. keteleeri.

conclusionsWe identified miRNAs differentially expressed between fertile and sterile flowers in V. macrocephalum f. keteleeri and provided new insights into the important regulatory roles of miRNAs in the differentiation and development of fertile and sterile flowers.

Indexed as

FlowersGene Expression Regulation, PlantMicroRNAsPlant InfertilityViburnumMicroRNAsFertile and sterile flowersFlower differentiation and developmentmiRNA profilingViburnum macrocephalum f. keteleeri

Identifiers

PMID29029607
PMCPMC5640959
OpenAlexW2761460283

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