Evidence map›Paper›PMID 29028885›Full record

ArticleBioinformatics (Oxford, England)2018

HoTResDB: host transcriptional response database for viral hemorrhagic fevers.

Jonathan Lo, Deric Zhang, Emily Speranza, Jose A Negron, John H Connor

Abstract read
In one paragraph

Article in Bioinformatics (Oxford, England), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jonathan LoBioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA.
Deric ZhangBioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA.
Emily SperanzaBioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA.
Jose A NegronBioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA.
John H ConnorBioinformatics Program, Boston University, 24 Cummington Mall, Boston, MA, USA.

Funding

Role for polyamines in Ebola Virus ReplicationR21AI121933 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CONNOR, JOHN H · 2016 to 2017
$452k
NIAID NIH HHS R21 AI121933
6 · The paper itself

Abstract

summaryHigh-throughput screening of the host transcriptional response to various viral infections provides a wealth of data, but utilization of microarray and next generation sequencing (NGS) data for analysis can be difficult. The Host Transcriptional Response DataBase (HoTResDB), allows visitors to access already processed microarray and NGS data from non-human primate models of viral hemorrhagic fever to better understand the host transcriptional response. AVAILABILITY: HoTResDB is freely available at http://hotresdb.bu.edu.

Identifiers

PMID29028885
PMCPMC5860212

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.