Evidence map›Paper›PMID 29028168›Full record

ArticleThe Journal of organic chemistry2017

Synthesis of a Pentasaccharide Fragment Related to the Inner Core Region of Rhizobial and Agrobacterial Lipopolysaccharides.

Nino Trattnig, Jean-Baptiste Farcet, Philipp Gritsch, Anna Christler, Ralph Pantophlet, Paul Kosma

Abstract read
In one paragraph

Article in The Journal of organic chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Chemoenzymatic Synthesis ofJournal of the American Chemical Society · 2020
    Article
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nino TrattnigDepartment of Chemistry, University of Natural Resources and Life Sciences , A-1190 Vienna, Austria.
Jean-Baptiste FarcetDepartment of Chemistry, University of Natural Resources and Life Sciences , A-1190 Vienna, Austria.
Philipp GritschDepartment of Chemistry, University of Natural Resources and Life Sciences , A-1190 Vienna, Austria.
Anna ChristlerDepartment of Chemistry, University of Natural Resources and Life Sciences , A-1190 Vienna, Austria.
Ralph PantophletFaculty of Health Sciences and Department of Molecular Biology and Biochemistry, Simon Fraser University , Burnaby, British Columbia V5A1S6, Canada.
Paul KosmaDepartment of Chemistry, University of Natural Resources and Life Sciences , A-1190 Vienna, Austria.ORCID 0000-0001-5342-7161

Funding

Synthetic bacterial analogs of mammalian oligomannose for eliciting neutralizing antibodies to the high-mannose patch on HIV EnvR01AI134299 · NIAID · SIMON FRASER UNIVERSITY · PI PANTOPHLET, RALPH ALPHONSO · 2017 to 2025
$3.8M
Austrian Science Fund FWF P 26919NIAID NIH HHS R01 AI134299
6 · The paper itself

Abstract

The pentasaccharide fragment α-d-Man-(1 → 5)-[α-d-Kdo-(2 → 4)-]α-d-Kdo-(2 → 6)-β-d-GlcNAc-(1 → 6)-α-d-GlcNAc equipped with a 3-aminopropyl spacer moiety was prepared by a sequential assembly of monosaccharide building blocks. The glucosamine disaccharide-as a backbone surrogate of the bacterial lipid A region-was synthesized using an 1,3-oxazoline donor, which was followed by coupling with an isopropylidene-protected Kdo-fluoride donor to afford a protected tetrasaccharide intermediate. Eventually, an orthogonally protected manno-configured trichloroacetimidate donor was used to achieve the sterically demanding glycosylation of the 5-OH group of Kdo in good yield. The resulting pentasaccharide is suitably protected for further chain elongation at positions 3, 4, and 6 of the terminal mannose. Global deprotection afforded the target pentasaccharide to be used for the conversion into neoglycoconjugates and "clickable" ligands.

Indexed as

DisaccharidesLipopolysaccharidesOligosaccharidesRhizobiumDisaccharidesLipopolysaccharidesOligosaccharides

Identifiers

PMID29028168
PMCPMC5715290

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.