Evidence map›Paper›PMID 29027299›Full record

ArticleHuman mutation2018

Functional characterization of novel NR5A1 variants reveals multiple complex roles in disorders of sex development.

Gorjana Robevska, Jocelyn A van den Bergen, Thomas Ohnesorg, Stefanie Eggers, Chloe Hanna, Remko Hersmus, Elizabeth M Thompson, Anne Baxendale, Charles F Verge, Antony R Lafferty and 9 more

Open access · hybridAbstract read
In one paragraph

Article in Human mutation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
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  10. International journal of molecular sciences · 2024
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  13. A Novel Variant inJCEM case reports · 2023
    Article
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  16. Observational
  17. Article
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  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 11 institutions in 5 countries.

Gorjana RobevskaMurdoch Children's Research Institute, Melbourne, Australia.
Jocelyn A van den BergenMurdoch Children's Research Institute, Melbourne, Australia.
Thomas OhnesorgMurdoch Children's Research Institute, Melbourne, Australia.
Stefanie EggersMurdoch Children's Research Institute, Melbourne, Australia.
Chloe HannaMurdoch Children's Research Institute, Melbourne, Australia.
Remko HersmusDepartment of Pathology, Josephine Nefkens Institute, Erasmus University Medical Centre, Rotterdam, The Netherlands.
Elizabeth M ThompsonSA Clinical Genetics Service, SA Pathology at the Women's and Children's Hospital, Adelaide, Australia.
Anne BaxendaleSA Clinical Genetics Service, SA Pathology at the Women's and Children's Hospital, Adelaide, Australia.
Charles F VergeSydney Children's Hospital, Sydney, Australia.
Antony R LaffertyCentenary Hospital for Women and Children, Canberra, Australia.
Nanis S MarzukiEijkman Institute for Molecular Biology, Jakarta, Indonesia.
Ardy SantosaDivision of Urology, Department of Surgery, Dr. Kariadi Hospital, Semarang, Indonesia.
Nurin A ListyasariDivision of Human Genetics, Centre for Biomedical Research Faculty of Medicine Diponegoro University (FMDU), Semarang, Indonesia.
Stefan RiedlSt Anna Children's Hospital, Department of Paediatrics, Medical University of Vienna, Wien, Austria.
Garry WarneMurdoch Children's Research Institute, Melbourne, Australia.
Leendert LooijengaDepartment of Pathology, Josephine Nefkens Institute, Erasmus University Medical Centre, Rotterdam, The Netherlands.
Sultana FaradzDivision of Human Genetics, Centre for Biomedical Research Faculty of Medicine Diponegoro University (FMDU), Semarang, Indonesia.
Katie L AyersMurdoch Children's Research Institute, Melbourne, Australia.ORCID 0000-0002-6840-3186
Andrew H SinclairMurdoch Children's Research Institute, Melbourne, Australia.
Murdoch Children's Research Institute · AUDiponegoro University · IDMeertens Institute · NLRoyal Children's Hospital · AUSouth Australia Pathology · AUThe University of Melbourne · AUAustralian National University · AUDr. Kariadi Hospital · IDEijkman Institute for Molecular Biology · IDSt Anna Children's Hospital · ATUNSW Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Variants in the NR5A1 gene encoding SF1 have been described in a diverse spectrum of disorders of sex development (DSD). Recently, we reported the use of a targeted gene panel for DSD where we identified 15 individuals with a variant in NR5A1, nine of which are novel. Here, we examine the functional effect of these changes in relation to the patient phenotype. All novel variants tested had reduced trans-activational activity, while several had altered protein level, localization, or conformation. In addition, we found evidence of new roles for SF1 protein domains including a region within the ligand binding domain that appears to contribute to SF1 regulation of Müllerian development. There was little correlation between the severity of the phenotype and the nature of the NR5A1 variant. We report two familial cases of NR5A1 deficiency with evidence of variable expressivity; we also report on individuals with oligogenic inheritance. Finally, we found that the nature of the NR5A1 variant does not inform patient outcomes (including pubertal androgenization and malignancy risk). This study adds nine novel pathogenic NR5A1 variants to the pool of diagnostic variants. It highlights a greater need for understanding the complexity of SF1 function and the additional factors that contribute.

Indexed as

Genetic Association StudiesGenetic VariationPhenotypeAllelesAmino Acid SequenceDisorder of Sex Development, 46,XYDisorders of Sex DevelopmentFemaleGenotypeHumansMaleModels, AnatomicMutationProtein ConformationProtein DomainsRNA Splice SitesNR5A1 protein, humanRNA Splice SitesSteroidogenic Factor 1disorders of sex developmentgenotype-phenotype correlationmutationNR5A1oligogenicvariable expressivity

Identifiers

PMID29027299
PMCPMC5765430
OpenAlexW2761941275

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.