Evidence map›Paper›PMID 29026541›Full record

ArticleCancer & metabolism2017

Molecular features that predict the response to antimetabolite chemotherapies.

Mahya Mehrmohamadi, Seong Ho Jeong, Jason W Locasale

Open access · goldAbstract read
In one paragraph

Article in Cancer & metabolism, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Mahya MehrmohamadiDuke Cancer Institute, Duke University School of Medicine, Durham, NC 27710 USA.
Seong Ho JeongDepartment of Molecular Biology and Genetics, Field of Genetics, Genomics and Development, Cornell University, Ithaca, NY 14853 USA.
Jason W LocasaleDuke Cancer Institute, Duke University School of Medicine, Durham, NC 27710 USA.ORCID 0000-0002-7766-3502
Duke University · USCornell University · US

Funding

Dietary methionine and cancerR01CA193256 · NCI · DUKE UNIVERSITY · PI LOCASALE, JASON W. · 2015 to 2023
$3.1M
Understanding metabolic flux and the control of mammalian cell growthR00CA168997 · NCI · DUKE UNIVERSITY · PI LOCASALE, JASON W. · 2013 to 2015
$695k
Data commons for 'omic, microscopy and analysis core facilitiesS10OD018164 · OD · DUKE UNIVERSITY · PI WRAY, GREGORY A. · 2014 to 2014
$598k
Characterization of the functions of one-carbon metabolism across human cancersK00CA212457 · NCI · STANFORD UNIVERSITY · PI MEHRMOHAMADI, MAHYA · 2017 to 2019
$228k
NCI NIH HHS K00 CA212457NCI NIH HHS R00 CA168997NCI NIH HHS R01 CA193256NIH HHS S10 OD018164
6 · The paper itself

Abstract

backgroundAntimetabolite chemotherapeutic agents that target cellular metabolism are widely used in the clinic and are thought to exert their anti-cancer effects mainly through non-specific cytotoxic effects. However, patients vary dramatically with respect to treatment outcome, and the sources of heterogeneity remain largely unknown.

methodsHere, we introduce a computational method for identifying gene expression signatures of response to chemotherapies and apply it to human tumors and cancer cell lines. Furthermore, we characterize a set of 17 antimetabolite agents in various contexts to investigate determinants of sensitivity to these agents.

resultsWe identify distinct favorable and unfavorable metabolic expression signatures for 5-FU and Gemcitabine. Importantly, we find that metabolic pathways targeted by each of these antimetabolites are specifically enriched in its expression signatures. We provide evidence against the common notion about non-specific cytotoxic functions of antimetabolite drugs.

conclusionsThis study demonstrates through unbiased analyses that the activities of metabolic pathways likely contribute to therapeutic response.

Indexed as

5-fluorouracilAntimetabolite chemotherapiesGemcitabineMolecular determinants of response to chemotherapy

Identifiers

PMID29026541
PMCPMC5627437
OpenAlexW2762611682

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.