Evidence map›Paper›PMID 29026154›Full record

ArticleScientific reports2017

Associations of interactions between NLRP3 SNPs and HLA mismatch with acute and extensive chronic graft-versus-host diseases.

Hidekazu Takahashi, Naoko Okayama, Natsu Yamaguchi, Yuta Miyahara, Yasuo Morishima, Yutaka Suehiro, Takahiro Yamasaki, Koji Tamada, Satoshi Takahashi, Arinobu Tojo and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Relationship Between anJournal of clinical medicine · 2025
    Article
  3. The inflammasomes: crosstalk between innate immunity and hematology.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2022
    Review
  4. Possible roles of anti-type II collagen antibody and innate immunity in the development and progression of diabetic retinopathy.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2022
    Review
  5. The Impact of NLRP3 Activation on Hematopoietic Stem Cell Transplantation.International journal of molecular sciences · 2021
    Review
  6. Article
  7. Review
  8. Article
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  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Hidekazu TakahashiDepartment of Public Health and Preventive Medicine, Yamaguchi University Graduate School of Medicine, Ube, Japan.
Naoko OkayamaDivision of Laboratory, Yamaguchi University Hospital, Ube, Japan.
Natsu YamaguchiDepartment of Public Health and Preventive Medicine, Yamaguchi University Graduate School of Medicine, Ube, Japan.
Yuta MiyaharaDivision of Laboratory, Yamaguchi University Hospital, Ube, Japan.
Yasuo MorishimaDivision of Epidemiology and Prevention, Aichi Cancer Center Research Institute, Nagoya, Japan.
Yutaka SuehiroDepartment of Oncology and Laboratory Medicine, Yamaguchi University Graduate School of Medicine, Ube, Japan.
Takahiro YamasakiDivision of Laboratory, Yamaguchi University Hospital, Ube, Japan.
Koji TamadaDepartment of Immunology, Yamaguchi University Graduate School of Medicine, Ube, Japan.
Satoshi TakahashiDepartment of Hematology and Oncology, Institute of Medical Science, The University of Tokyo, Tokyo, Japan.
Arinobu TojoDepartment of Hematology and Oncology, Institute of Medical Science, The University of Tokyo, Tokyo, Japan.ORCID 0000-0001-9016-1948
Shigetaka AsanoResearch Organization for Nano & Life Innovation, Waseda University, Tokyo, Japan.
Tsuyoshi TanabeDepartment of Public Health and Preventive Medicine, Yamaguchi University Graduate School of Medicine, Ube, Japan. tanabe@yamaguchi-u.ac.jp.
Yamaguchi University · JPThe University of Tokyo · JPYamaguchi University Hospital · JPAichi Cancer Center · JPWaseda University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HLA matching is a well-known genetic requirement for successful bone marrow transplantation (BMT). However, the importance of non-HLA single-nucleotide polymorphisms (SNPs) remains poorly understood. The NLR family pyrin domain-containing 3 (NLRP3) inflammasome, a key regulator of innate immunity, is associated with multiple diseases. We retrospectively genotyped SNPs of NLRP1-3 and caspase recruitment domain family member 8 (CARD8), which are implicated in the interleukin 1β (IL-1β) signaling, in 999 unrelated BMT donor-recipient pairs. We identified an association of the interaction between the recipient NLRP3 SNP CC genotype and total HLA mismatches with grade 2-4 acute graft-versus-host disease (AGVHD), and an association of the interaction between the donor NLRP3 SNP T allele and HLA-C mismatch with extensive chronic GVHD (ECGVHD), in both adjusted and unadjusted regressions (P < 0.005). Importantly, the ECGVHD risk associated with HLA-C mismatch was not elevated when the donor NLRP3 genotype was CC. We also identified an association of the interaction between recipient NLRP3 SNP and donor cytomegalovirus seropositivity with overall survival in adjusted regressions (P < 0.005). These results suggest the importance of certain SNP-covariate interactions in unrelated BMT. The three identified interactions may be useful for donor selection or outcome prediction.

Indexed as

FemaleGraft vs Host DiseaseHumansInflammasomesInterleukin-1betaKaplan-Meier EstimateMaleMultivariate AnalysisNLR Family, Pyrin Domain-Containing 3 ProteinPolymorphism, Single NucleotideProportional Hazards ModelsRetrospective StudiesInflammasomesInterleukin-1betaNLR Family, Pyrin Domain-Containing 3 Protein

Identifiers

PMID29026154
PMCPMC5638959
OpenAlexW2763815202

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.