Evidence map›Paper›PMID 29026132›Full record

ArticleScientific reports2017

Evidence of Early-Stage Selection on EPAS1 and GPR126 Genes in Andean High Altitude Populations.

Christina A Eichstaedt, Luca Pagani, Tiago Antao, Charlotte E Inchley, Alexia Cardona, Alexander Mörseburg, Florian J Clemente, Timothy J Sluckin, Ene Metspalu, Mario Mitt and 6 more

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Review
  2. Advancing high-altitude medicine: a model for the future.Signal transduction and targeted therapy · 2026
    Review
  3. Exploring the genetic footprints of high altitude adapted humans and livestock.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review
  4. Genetic adaptations shaping survival, pregnancy, and life at high altitude and sea level.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  5. Advances in Understanding Adaptive Hemoglobin Concentration at High Altitude.American journal of human biology : the official journal of the Human Biology Council · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. FunctionalScience advances · 2024
    Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Christina A EichstaedtThoraxclinic at the University Hospital Heidelberg, Heidelberg, Baden-Württemberg, Germany. Christina.eichstaedt@med.uni-heidelberg.de.ORCID 0000-0001-7288-8297
Luca PaganiDepartment of Archaeology and Anthropology, University of Cambridge, Cambridge, Cambridgeshire, UK.
Tiago AntaoDivision of Biological Sciences, University of Montana, Missoula, Missoula County, Montana, USA.
Charlotte E InchleyDepartment of Archaeology and Anthropology, University of Cambridge, Cambridge, Cambridgeshire, UK.
Alexia CardonaMRC Epidemiology Unit, University of Cambridge, Cambridge, Cambridgeshire, UK.
Alexander MörseburgDepartment of Archaeology and Anthropology, University of Cambridge, Cambridge, Cambridgeshire, UK.
Florian J ClementeInstitute for Computational Biology, University of Montpellier, Montferrier-sur-Lez, Hérault, France.
Timothy J SluckinMathematical Sciences, University of Southampton, Southampton, Hampshire, UK.ORCID 0000-0002-9163-0061
Ene MetspaluEstonian Biocentre, Tartu, Tartumaa, Estonia.
Mario MittEstonian Genome Centre, University of Tartu, Tartu, Tartumaa, Estonia.
Reedik MägiEstonian Genome Centre, University of Tartu, Tartu, Tartumaa, Estonia.
Georgi HudjashovEstonian Biocentre, Tartu, Tartumaa, Estonia.
Mait MetspaluEstonian Biocentre, Tartu, Tartumaa, Estonia.
Maru MorminaDepartment of Applied Sciences, Faculty of Humanities and Social Sciences, University of Winchester, Winchester, Hampshire, UK.
Guy S JacobsComplexity Institute, Nanyang Technological University, Singapore, Singapore. guysjacobs@ntu.edu.sg.
Toomas KivisildDepartment of Archaeology and Anthropology, University of Cambridge, Cambridge, Cambridgeshire, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study is to identify genetic variants that harbour signatures of recent positive selection and may facilitate physiological adaptations to hypobaric hypoxia. To achieve this, we conducted whole genome sequencing and lung function tests in 19 Argentinean highlanders (>3500 m) comparing them to 16 Native American lowlanders. We developed a new statistical procedure using a combination of population branch statistics (PBS) and number of segregating sites by length (nSL) to detect beneficial alleles that arose since the settlement of the Andes and are currently present in 15-50% of the population. We identified two missense variants as significant targets of selection. One of these variants, located within the GPR126 gene, has been previously associated with the forced expiratory volume/forced vital capacity ratio. The other novel missense variant mapped to the EPAS1 gene encoding the hypoxia inducible factor 2α. EPAS1 is known to be the major selection candidate gene in Tibetans. The derived allele of GPR126 is associated with lung function in our sample of highlanders (p < 0.05). These variants may contribute to the physiological adaptations to hypobaric hypoxia, possibly by altering lung function. The new statistical approach might be a useful tool to detect selected variants in population studies.

Indexed as

AltitudeSelection, GeneticAllelesArgentinaBasic Helix-Loop-Helix ProteinsEndothelial PAS Domain-Containing Protein 1Gene FrequencyHumansReceptors, G-Protein-CoupledADGRG6 protein, humanBasic Helix-Loop-Helix ProteinsEndothelial PAS Domain-Containing Protein 1Receptors, G-Protein-Coupled

Identifiers

PMID29026132
PMCPMC5638799

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.