Evidence map›Paper›PMID 29026044›Full record

ArticleScience (New York, N.Y.)2017

Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water.

Joshua A Riback, Micayla A Bowman, Adam M Zmyslowski, Catherine R Knoverek, John M Jumper, James R Hinshaw, Emily B Kaye, Karl F Freed, Patricia L Clark, Tobin R Sosnick

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 143 papers.

0numbers the graph read from it
0cells of the map it votes in
143citing papers in PubMed
9.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

143 citing papers in PubMed, 255 citations in OpenAlex.

  1. New perspectives on plant water sensing.Science China. Life sciences · 2026
    Article
  2. Article
  3. Article
  4. AF-CALVADOS: AlphaFold-guided simulations of multi-domain proteins at the proteome level.Protein science : a publication of the Protein Society · 2026
    Article
  5. Article
  6. Enzymatic Encoding of Topology in an Intrinsically Disordered Single-Chain Protein.Angewandte Chemie (International ed. in English) · 2026
    Article
  7. Distinguishing near- versus off-critical phase behaviors of intrinsically disordered proteins.Reports on progress in physics. Physical Society (Great Britain) · 2026
    Article
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  10. Review
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  18. Identification of an on-pathway intermediate illuminates the kinetic competition between protein folding and misfolding.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  19. Review
  20. Article

83 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Joshua A RibackGraduate Program in Biophysical Sciences, University of Chicago, Chicago, IL 60637, USA.ORCID 0000-0002-1516-4484
Micayla A BowmanDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.ORCID 0000-0002-5713-4400
Adam M ZmyslowskiDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL 60637, USA.
Catherine R KnoverekDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.ORCID 0000-0003-2660-9466
John M JumperDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL 60637, USA.ORCID 0000-0001-6169-6580
James R HinshawDepartment of Chemistry and James Franck Institute, University of Chicago, Chicago, IL 60637, USA.
Emily B KayeDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
Karl F FreedDepartment of Chemistry and James Franck Institute, University of Chicago, Chicago, IL 60637, USA.
Patricia L ClarkDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA. pclark1@nd.edu trsosnic@uchicago.edu.ORCID 0000-0001-5462-8248
Tobin R SosnickDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL 60637, USA. pclark1@nd.edu trsosnic@uchicago.edu.ORCID 0000-0002-2871-7244
University of Chicago · USUniversity of Notre Dame · US

Funding

Molecular And Cellular Biology Training ProgramT32GM007183 · NIGMS · UNIVERSITY OF CHICAGO · PI GLICK, BENJAMIN S, RICE, PHOEBE A · 1985 to 2021
$23.9M
Time resolved SAXS studies on the RP2/Arl3 complex pp.484-485P41GM103622 · NIGMS · ILLINOIS INSTITUTE OF TECHNOLOGY · PI IRVING, THOMAS C · 2012 to 2020
$11.9M
Kinetic studies of protein foldingR01GM055694 · NIGMS · UNIVERSITY OF CHICAGO · PI SOSNICK, TOBIN R · 2001 to 2022
$7.6M
Graduate Program in Biophysical Sciences at the University of Chicago - Renewal 0T32EB009412 · NIBIB · UNIVERSITY OF CHICAGO · PI ENGEL, GREGORY S, SOSNICK, TOBIN R · 2009 to 2023
$4.9M
Predoctoral Training Program in Chemistry & BiologyT32GM008720 · NIGMS · UNIVERSITY OF CHICAGO · PI PICCIRILLI, JOSEPH ANTHONY · 1999 to 2020
$4.7M
Manipulating and predicting the unfolded ensembles of disordered proteinsR01GM130122 · NIGMS · UNIVERSITY OF CHICAGO · PI CLARK, PATRICIA LOUISE, SOSNICK, TOBIN R · 2018 to 2021
$1.4M
OUTER MEMBRANE SECRETION MECHANISM FOR AUTOTRANSPORTER PROTEINSR01GM097573 · NIGMS · UNIVERSITY OF NOTRE DAME · PI CLARK, PATRICIA LOUISE · 2011 to 2014
$1.1M
Advanced Pixel Array Detector for Time-Resolved SAXS and Fiber DiffractionS10OD018090 · OD · ILLINOIS INSTITUTE OF TECHNOLOGY · PI IRVING, THOMAS C · 2014 to 2014
$529k
FOLDING OF AN ALPHA-HELICAL COILED COILR29GM055694 · NIGMS · UNIVERSITY OF CHICAGO · PI SOSNICK, TOBIN R · 1996 to 2000
$107k
NIBIB NIH HHS T32 EB009412NIGMS NIH HHS P41 GM103622NIGMS NIH HHS R01 GM055694NIGMS NIH HHS R01 GM097573NIGMS NIH HHS R01 GM130122NIGMS NIH HHS R29 GM055694NIGMS NIH HHS T32 GM007183NIGMS NIH HHS T32 GM008720NIH HHS S10 OD018090
6 · The paper itself

Abstract

A substantial fraction of the proteome is intrinsically disordered, and even well-folded proteins adopt non-native geometries during synthesis, folding, transport, and turnover. Characterization of intrinsically disordered proteins (IDPs) is challenging, in part because of a lack of accurate physical models and the difficulty of interpreting experimental results. We have developed a general method to extract the dimensions and solvent quality (self-interactions) of IDPs from a single small-angle x-ray scattering measurement. We applied this procedure to a variety of IDPs and found that even IDPs with low net charge and high hydrophobicity remain highly expanded in water, contrary to the general expectation that protein-like sequences collapse in water. Our results suggest that the unfolded state of most foldable sequences is expanded; we conjecture that this property was selected by evolution to minimize misfolding and aggregation.

Indexed as

Protein FoldingScattering, Small AngleBacterial Outer Membrane ProteinsHydrophobic and Hydrophilic InteractionsIntrinsically Disordered ProteinsProtein Conformation, alpha-HelicalProtein DomainsVirulence Factors, BordetellaWaterX-Ray DiffractionBacterial Outer Membrane ProteinsIntrinsically Disordered ProteinspertactinVirulence Factors, BordetellaWater

Identifiers

PMID29026044
PMCPMC5959285
OpenAlexW2761503010

What OpenQuestion holds

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LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.