Evidence map›Paper›PMID 29023469›Full record

ArticlePloS one2017

The common oncogenomic program of NOTCH1 and NOTCH3 signaling in T-cell acute lymphoblastic leukemia.

Sung Hee Choi, Eric Severson, Warren S Pear, Xiaole S Liu, Jon C Aster, Stephen C Blacklow

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
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  4. Nagoya journal of medical science · 2025
    Article
  5. Modes of Notch signalling in development and disease.Nature reviews. Molecular cell biology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Sung Hee ChoiDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, United States of America.
Eric SeversonDepartment of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, United States of America.
Warren S PearDepartment of Pathology and Laboratory Medicine, Abramson Family Cancer Research Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, United States of America.
Xiaole S LiuDepartments of Biostatistics and Computational Biology, Dana Farber Cancer Institute, and Harvard School of Public Health, Boston, MA, United States of America.
Jon C AsterDepartment of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, United States of America.
Stephen C BlacklowDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, United States of America.ORCID http://orcid.org/0000-0002-6904-1981
Brigham and Women's Hospital · USCancer Research Institute · USDana-Farber Cancer Institute · USHarvard University · US

Funding

Notch Signaling in CancerR35CA220340 · NCI · HARVARD MEDICAL SCHOOL · PI BLACKLOW, STEPHEN C. · 2017 to 2023
$7.1M
Structure and Function in Notch SignalingR01CA092433 · NCI · HARVARD MEDICAL SCHOOL · PI BLACKLOW, STEPHEN C. · 2002 to 2016
$5.0M
Tumor Sensitization to Purine Analogs by E. coli PNPR01CA119170 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SORSCHER, ERIC J · 2006 to 2010
$1.6M
NCI NIH HHS R01 CA092433NCI NIH HHS R01 CA119170NCI NIH HHS R35 CA220340
6 · The paper itself

Abstract

Notch is a major oncogenic driver in T cell acute lymphoblastic leukemia (T-ALL), in part because it binds to an enhancer that increases expression of MYC. Here, we exploit the capacity of activated NOTCH1 and NOTCH3 to induce T-ALL, despite substantial divergence in their intracellular regions, as a means to elucidate a broad, common Notch-dependent oncogenomic program through systematic comparison of the transcriptomes and Notch-bound genomic regulatory elements of NOTCH1- and NOTCH3-dependent T-ALL cells. ChIP-seq studies show a high concordance of functional NOTCH1 and NOTCH3 genomic binding sites that are enriched in binding motifs for RBPJ, the transcription factor that recruits activated Notch to DNA. The interchangeability of NOTCH1 and NOTCH3 was confirmed by rescue of NOTCH1-dependent T-ALL cells with activated NOTCH3 and vice versa. Despite remarkable overall similarity, there are nuanced differences in chromatin landscapes near critical common Notch target genes, most notably at a Notch-dependent enhancer that regulates MYC, which correlates with responsiveness to Notch pathway inhibitors. Overall, a common oncogenomic program driven by binding of either Notch is sufficient to maintain T-ALL cell growth, whereas cell-context specific differences appear to influence the response of T-ALL cells to Notch inhibition.

Indexed as

Signal TransductionCell Line, TumorGene Expression Regulation, LeukemicHumansImmunoglobulin J Recombination Signal Sequence-Binding ProteinPrecursor T-Cell Lymphoblastic Leukemia-LymphomaProto-Oncogene Proteins c-mycReceptor, Notch1Receptor, Notch3Response ElementsImmunoglobulin J Recombination Signal Sequence-Binding ProteinMYC protein, humanNOTCH1 protein, humanNOTCH3 protein, humanProto-Oncogene Proteins c-mycRBPJ protein, humanReceptor, Notch1Receptor, Notch3

Identifiers

PMID29023469
PMCPMC5638296
OpenAlexW2761492606

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.