Evidence map›Paper›PMID 29020646›Full record

ArticleVirology2017

HIV-1 subtype CRF01_AE and B differ in utilization of low levels of CCR5, Maraviroc susceptibility and potential N-glycosylation sites.

Anjali Joshi, Emily K Cox, Melina J Sedano, Erin B Punke, Raphael Tc Lee, Sebastian Maurer-Stroh, Palvinder Kaur, Oon Tek Ng, Himanshu Garg

Abstract read
In one paragraph

Article in Virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Anjali JoshiDepartment of Biomedical Sciences, Texas Tech University Health Sciences Center, El Paso, TX, USA. Electronic address: anjali.joshi@ttuhsc.edu.
Emily K CoxDepartment of Biomedical Sciences, Texas Tech University Health Sciences Center, El Paso, TX, USA.
Melina J SedanoDepartment of Biomedical Sciences, Texas Tech University Health Sciences Center, El Paso, TX, USA.
Erin B PunkeDepartment of Biomedical Sciences, Texas Tech University Health Sciences Center, El Paso, TX, USA.
Raphael Tc LeeBioinformatics Institute, Agency for Science, Technology and Research, Singapore.
Sebastian Maurer-StrohBioinformatics Institute, Agency for Science, Technology and Research, Singapore; Department of Biological Sciences, National University of Singapore, Singapore.
Palvinder KaurDepartment of Infectious Disease, Tan Tock Seng Hospital, Singapore.
Oon Tek NgDepartment of Infectious Disease, Tan Tock Seng Hospital, Singapore.
Himanshu GargDepartment of Biomedical Sciences, Texas Tech University Health Sciences Center, El Paso, TX, USA. Electronic address: himanshu.garg@ttuhsc.edu.

Funding

Host and Viral Factors in HIV Pathogenesis.R15AI116240 · NIAID · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI GARG, HIMANSHU · 2015 to 2015
$383k
NIAID NIH HHS R15 AI116240
6 · The paper itself

Abstract

HIV subtypes not only predominate in different geographical regions but also differ in key phenotypic characteristics. To determine if genotypic and/or phenotypic differences in the Envelope (Env) glycoprotein can explain subtype related differences, we cloned 37 full length Envs from Subtype B and AE HIV infected individuals from Singapore. Our data demonstrates that CRF01_AE Envs have lower Potential N Glycosylation Sites and higher risk of ×4 development. Phenotypically, CRF01_AE were less infectious than subtype B Envs in cells expressing low levels of CCR5. Moreover, the Maraviroc IC

Indexed as

Cell LineCloning, MolecularCyclohexanesenv Gene Products, Human Immunodeficiency VirusGene Expression Regulation, ViralGlycosylationHIV-1HumansMaravirocModels, MolecularProtein ConformationReceptors, CCR5TriazolesVirus ReplicationCCR5 protein, humanCyclohexanesenv Gene Products, Human Immunodeficiency VirusMaravirocReceptors, CCR5TriazolesAIDSCCR5CD4CRF01_AEEnvelopegp120HIVMaravirocPNGSSubtype B

Identifiers

PMID29020646
PMCPMC5653400

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.