Evidence map›Paper›PMID 29017598›Full record

ArticleArthritis research & therapy2017

Behçet's disease risk association fine-mapped on the IL23R-IL12RB2 intergenic region in Koreans.

Eun Ha Kang, Sewon Kim, Min Young Park, Ji Yong Choi, In Ah Choi, Min Jung Kim, You-Jung Ha, Eun Young Lee, Yun Jong Lee, Eun Bong Lee and 2 more

Open access · goldAbstract read
In one paragraph

Article in Arthritis research & therapy, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. STAT4 gene polymorphisms in human diseases.Frontiers in immunology · 2024
    Review
  4. Genetics in Behcet's Disease: An Update Review.Frontiers in ophthalmology · 2022
    Review
  5. The Immunogenetics of Behcet's Disease.Advances in experimental medicine and biology · 2022
    Article
  6. The Immunogenetics of Vasculitis.Advances in experimental medicine and biology · 2022
    Review
  7. Review
  8. Article
  9. A Darwinian View of Behçet's Disease.Rheumatology and immunology research · 2021
    Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

Eun Ha KangDivision of Rheumatology, Department of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, South Korea.
Sewon KimDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, South Korea.
Min Young ParkDNA Link, Inc, Seoul, South Korea.
Ji Yong ChoiDivision of Rheumatology, Department of Internal Medicine, Seoul National University Hospital, Seoul, South Korea.
In Ah ChoiDivision of Rheumatology, Department of Internal Medicine, Chungbuk National University Hospital, Daejeon, South Korea.
Min Jung KimDivision of Rheumatology, Department of Internal Medicine, Seoul National University Hospital, Seoul, South Korea.
You-Jung HaDivision of Rheumatology, Department of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, South Korea.
Eun Young LeeDivision of Rheumatology, Department of Internal Medicine, Seoul National University Hospital, Seoul, South Korea.
Yun Jong LeeDivision of Rheumatology, Department of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, South Korea.
Eun Bong LeeDivision of Rheumatology, Department of Internal Medicine, Seoul National University Hospital, Seoul, South Korea.
Changwon KangDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, South Korea. ckang@kaist.ac.kr.
Yeong Wook SongDivision of Rheumatology, Department of Internal Medicine, Seoul National University Hospital, Seoul, South Korea. ysong@snu.ac.kr.
Seoul National University Hospital · KRSeoul National University Bundang Hospital · KRKorea Advanced Institute of Science and Technology · KRChungbuk National University Hospital · KRDNA Link (South Korea) · KRSeoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBehçet's disease (BD) susceptibility had been associated with single-nucleotide polymorphisms (SNPs) in IL23R-IL12RB2, IL10, STAT4, or ERAP1 locus in Japanese, Turkish, Chinese, and other populations, but not in a Korean genome-wide association study (GWAS). We aimed to fine-map BD risk association of these four loci using extensive imputation and additional genotyping for replication.

methodsIn the discovery phase, 369 patients with BD enrolled in the previous Korean GWAS and 2000 controls retrieved from a population-based cohort of healthy Koreans were imputed for their genotypes of all SNPs in the four loci using the Asian data of the 1000 Genomes Project as reference. For genotype imputation of ERAP1 SNPs, the adjacent ERAP2 SNPs were also covered. For the 10 most significantly associated SNPs (8 imputed and 2 GWAS-genotyped), an additional 84 patients with BD and 283 healthy controls were genotyped for replication. The results from the discovery and replication phases were pooled for meta-analysis using the Mantel-Haenszel test to estimate the odds ratio (OR) and 95% confidence interval (CI).

resultsAn IL23R-IL12RB2 intergenic SNP rs1495965 was significantly associated with BD risk (OR (95% CI) = 1.5 (1.3, 1.7), P = 2.5 × 10

conclusionsBD susceptibility association was fine-mapped on the intergenic region between IL23R and IL12RB2 as marked by three correlated SNPs, rs1495965, rs1495966, and rs4655535.

Indexed as

AdultAsian PeopleBehcet SyndromeCase-Control StudiesDNA, IntergenicFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansKoreaMaleMiddle AgedPolymorphism, Single NucleotideReceptors, InterleukinReceptors, Interleukin-12DNA, IntergenicIL12RB2 protein, humanIL23R protein, humanReceptors, InterleukinReceptors, Interleukin-12Behçet’s diseaseCase-control disease-association studyERAP1GenotypingIL10IL12RB2IL23RImputationSTAT4

Identifiers

PMID29017598
PMCPMC5633897
OpenAlexW2763606953

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.