Evidence map›Paper›PMID 29016359›Full record

ArticleAging2017

Age-related gene expression in luminal epithelial cells is driven by a microenvironment made from myoepithelial cells.

Masaru Miyano, Rosalyn W Sayaman, Marcus H Stoiber, Chun-Han Lin, Martha R Stampfer, James B Brown, Mark A LaBarge

Open access · greenAbstract read
In one paragraph

Article in Aging, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. CD105Breast cancer research : BCR · 2025
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  16. Breast-Specific Molecular Clocks Comprised ofCancer prevention research (Philadelphia, Pa.) · 2021
    Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Masaru Miyano *Department of Population Sciences, City of Hope, Duarte, CA, 91010, USA.
Rosalyn W Sayaman *Department of Population Sciences, City of Hope, Duarte, CA, 91010, USA.
Marcus H StoiberEnvrionmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Chun-Han LinBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Martha R StampferBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
James B BrownEnvrionmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Mark A LaBargeDepartment of Population Sciences, City of Hope, Duarte, CA, 91010, USA.
Lawrence Berkeley National Laboratory · USCity of Hope · USUniversity of Bergen · NOUniversity of Birmingham · GB

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI XIWEI WU · 1985 to 2026
$86.3M
Mechanical Phenotyping of Random Periaerolar Fine Needle Aspiration-Collected Cells for Early Breast Cancer DetectionR01EB024989 · NIBIB · UNIVERSITY OF CALIFORNIA BERKELEY · PI Mark A LaBarge, Lydia L Sohn · 2017 to 2026
$4.8M
Age-related shifts in epithelial lineages and tissue homeostasis in mammary gland 5R01AG040081-05R01AG040081 · NIA · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI LABARGE, MARK A · 2011 to 2015
$2.3M
Stem Cell Engineering Training ProgramT32GM098218 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI HEALY, KEVIN EDWARD, SCHAFFER, DAVID V · 2011 to 2020
$1.8M
Nonparametric methods for functional and translational genomicsR00HG006698 · NHGRI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI BROWN, JAMES BENTLEY · 2014 to 2016
$747k
NCI NIH HHS P30 CA033572NHGRI NIH HHS R00 HG006698NIA NIH HHS R01 AG040081NIBIB NIH HHS R01 EB024989NIGMS NIH HHS T32 GM098218
6 · The paper itself

Abstract

Luminal epithelial cells in the breast gradually alter gene and protein expression with age, appearing to lose lineage-specificity by acquiring myoepithelial-like characteristics. We hypothesize that the luminal lineage is particularly sensitive to microenvironment changes, and age-related microenvironment changes cause altered luminal cell phenotypes. To evaluate the effects of different microenvironments on the fidelity of epigenetically regulated luminal and myoepithelial gene expression, we generated a set of lineage-specific probes for genes that are controlled through DNA methylation. Culturing primary luminal cells under conditions that favor myoepithelial propogation led to their reprogramming at the level of gene methylation, and to a more myoepithelial-like expression profile. Primary luminal cells' lineage-specific gene expression could be maintained when they were cultured as bilayers with primary myoepithelial cells. Isogenic stromal fibroblast co-cultures were unable to maintain the luminal phenotype. Mixed-age luminal-myoepithelial bilayers revealed that luminal cells adopt transcription and methylation patterns consistent with the chronological age of the myoepithelial cells. We provide evidence that the luminal epithelial phenotype is exquisitely sensitive to microenvironment conditions, and that states of aging are cell non-autonomously communicated through microenvironment cues over at least one cell diameter.

Indexed as

AgingCellular MicroenvironmentBreastCell LineageCoculture TechniquesEpithelial CellsFemaleHumansPhenotypeTranscriptomeagingbreast cancerepigeneticmammary epitheliamicroenvironment

Identifiers

PMID29016359
PMCPMC5680554
OpenAlexW2762297591

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.