Evidence map›Paper›PMID 28993676›Full record

ArticleScientific reports2017

Properties analysis of transcription factor gene TasMYB36 from Trichoderma asperellum CBS433.97 and its heterogeneous transfomation to improve antifungal ability of Populus.

Shida Ji, Zhiying Wang, Jinjie Wang, Haijuan Fan, Yucheng Wang, Zhihua Liu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. The MYB Transcription FactorInternational journal of molecular sciences · 2024
    Article
  2. Article
  3. Frontiers in plant science · 2021
    Article
  4. Hydrophobin HFBII-4 from Trichoderma asperellum induces antifungal resistance in poplar.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Shida JiSchool of Forestry, Northeast Forestry University, 26 Hexing Road, 150040, Harbin, China.
Zhiying WangSchool of Forestry, Northeast Forestry University, 26 Hexing Road, 150040, Harbin, China.
Jinjie WangSchool of Forestry, Northeast Forestry University, 26 Hexing Road, 150040, Harbin, China.
Haijuan FanSchool of Forestry, Northeast Forestry University, 26 Hexing Road, 150040, Harbin, China.
Yucheng WangSchool of Forestry, Northeast Forestry University, 26 Hexing Road, 150040, Harbin, China.
Zhihua LiuSchool of Forestry, Northeast Forestry University, 26 Hexing Road, 150040, Harbin, China. LZHNEFU@126.com.
Northeast Forestry University · CNChinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcription of TasMYB36 in the biocontrol species T. asperellum was upregulated in four different pathogenic fermentation broths, suggesting that TasMYB36 plays an important role in the response to biotic stresses. Seventy-nine MYB transcription factors that were homologous to TasMYB36 from six sequenced Trichoderma genomes were analyzed. They were distributed in fourteen clades in the phylogenetic tree. The 79 MYBs contained 113 DNA binding domains, and their amino acid sequences were conserved and were different to those in plants. The promoters of 79 MYBs contained 1374 cis-regulators related to the stress response, such as GCR1 (17.5%) and GCN4 (15.5%). Subsequently, TasMYB36 was integrated into the genome of Populus davidiana × P. alba var. pyramidalis (PdPap poplar), and after co-culture of the transformants (PdPap-TasMYB36s) with Alternaria alternate, the transcription of genes in the jasmonic acid (JA) and salicylic acid (SA) hormone signaling pathways were upregulated; the POD, SOD and CAT activities were enhanced; and the reactive oxygen content was reduced in PdPap-TasMYB36s. The disease spots area on PdPap-TasMYB36s leaves infected by A. alternate were average 0.63% (PdPap-Con: 24.7%). In summary, TasMYB36 of T. asperellum CBS433.97 is an important defense response gene that upregulates other stress response genes and could improve resistance to biotic stresses.

Indexed as

Genes, FungalTransformation, GeneticAlternariaAmino Acid SequenceAntifungal AgentsBase SequenceComputational BiologyFermentationFungal ProteinsGene Expression Regulation, FungalPhylogenyPopulusPromoter Regions, GeneticSignal TransductionStress, PhysiologicalTranscription FactorsAntifungal AgentsFungal ProteinsTranscription Factors

Identifiers

PMID28993676
PMCPMC5634415
OpenAlexW2764301656

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.