Evidence map›Paper›PMID 28989970›Full record

ArticlemSphere

Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon.

Bruno S de O Silva, Felipe H Coutinho, Gustavo B Gregoracci, Luciana Leomil, Louisi S de Oliveira, Adriana Fróes, Diogo Tschoeke, Ana Carolina Soares, Anderson S Cabral, Nicholas D Ward and 6 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mSphere. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 3 countries.

Bruno S de O SilvaLaboratory of Microbiology, Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil.
Felipe H CoutinhoLaboratory of Microbiology, Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil.
Gustavo B GregoracciDepartment of Marine Sciences, UNIFESP Baixada Santista, Santos, SP, Brazil.
Luciana LeomilLaboratory of Microbiology, Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil.
Louisi S de OliveiraLaboratory of Microbiology, Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil.
Adriana FróesLaboratory of Microbiology, Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil.
Diogo TschoekeLaboratory of Microbiology, Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil.
Ana Carolina SoaresLaboratory of Microbiology, Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil.
Anderson S CabralLaboratory of Hydrobiology, Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil.
Nicholas D WardMarine Sciences Laboratory, Pacific Northwest National Laboratory, Sequim, Washington, USA.
Jeffrey E RicheySchool of Oceanography, University of Washington, Seattle, Washington, USA.
Alex V KruscheCenter of Nuclear Energy in Agriculture (CENA), Federal University of São Paulo (USP), Piracicaba, SP, Brazil.
Patricia L YagerDepartment of Marine Sciences, University of Georgia, Athens, Georgia, USA.
Carlos Eduardo de RezendeLaboratory of Environmental Sciences, Darcy Ribeiro State University of Northern of Rio de Janeiro (UENF), Campos, RJ, Brazil.
Cristiane C ThompsonLaboratory of Microbiology, Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil.
Fabiano L ThompsonLaboratory of Microbiology, Institute of Biology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil.
Universidade Federal do Rio de Janeiro · BRUniversidade Federal de São Paulo · BRPacific Northwest National Laboratory · USRadboud University Nijmegen · NLState University of Norte Fluminense · BRUniversity of Georgia · USUniversity of Washington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Amazon River watershed and its associated plume comprise a vast continental and oceanic area. The microbial activities along this continuum contribute substantially to global carbon and nutrient cycling, and yet there is a dearth of information on the diversity, abundance, and possible roles of viruses in this globally important river. The aim of this study was to elucidate the diversity and structure of virus assemblages of the Amazon River-ocean continuum. Environmental viral DNA sequences were obtained for 12 locations along the river's lower reach (

Indexed as

Amazon Rivermicrobial communitiesnext-generation sequencingriver ecologyriver plumevirome

Identifiers

PMID28989970
PMCPMC5628290
OpenAlexW2762105522

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.