Evidence map›Paper›PMID 28986522›Full record

ArticleNature communications2017

Mammalian APE1 controls miRNA processing and its interactome is linked to cancer RNA metabolism.

Giulia Antoniali, Fabrizio Serra, Lisa Lirussi, Mikiei Tanaka, Chiara D'Ambrosio, Shiheng Zhang, Slobodanka Radovic, Emiliano Dalla, Yari Ciani, Andrea Scaloni and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 123 citations in OpenAlex.

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17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 4 countries.

Giulia AntonialiDepartment of Medicine, Laboratory of Molecular Biology and DNA repair, University of Udine, p.le M. Kolbe 4, Udine, 33100, Italy.ORCID http://orcid.org/0000-0002-2639-1893
Fabrizio SerraDepartment of Medicine, Laboratory of Molecular Biology and DNA repair, University of Udine, p.le M. Kolbe 4, Udine, 33100, Italy.
Lisa LirussiDepartment of Medicine, Laboratory of Molecular Biology and DNA repair, University of Udine, p.le M. Kolbe 4, Udine, 33100, Italy.
Mikiei TanakaLaboratory of Biochemistry, National Heart Lung and Blood Institute, National Institutes of Health, 50 South Drive, MSC-8012, Bethesda, MD, 20892-8012, USA.
Chiara D'AmbrosioProteomics and Mass Spectrometry Laboratory, Institute for the Animal Production System in the Mediterranean Environment (ISPAAM) National Research Council (CNR) of Italy, via Argine 1085, Naples, 80147, Italy.
Shiheng ZhangCancer Center of Daping Hospital, Third Military Medical University, Chongqing, 400042, China.
Slobodanka RadovicIGA Technology Services srl, via J. Linussio 51, Udine, 33100, Italy.
Emiliano DallaLaboratorio Nazionale CIB, Area Science Park Padriciano, Trieste, 34149, Italy.
Yari CianiLaboratorio Nazionale CIB, Area Science Park Padriciano, Trieste, 34149, Italy.
Andrea ScaloniProteomics and Mass Spectrometry Laboratory, Institute for the Animal Production System in the Mediterranean Environment (ISPAAM) National Research Council (CNR) of Italy, via Argine 1085, Naples, 80147, Italy.
Mengxia LiCancer Center of Daping Hospital, Third Military Medical University, Chongqing, 400042, China. mengxia.li@outlook.com.
Silvano PiazzaLaboratorio Nazionale CIB, Area Science Park Padriciano, Trieste, 34149, Italy. silvano.piazza@unitn.it.ORCID http://orcid.org/0000-0002-7156-5434
Gianluca TellDepartment of Medicine, Laboratory of Molecular Biology and DNA repair, University of Udine, p.le M. Kolbe 4, Udine, 33100, Italy. gianluca.tell@uniud.it.ORCID http://orcid.org/0000-0001-8845-6448
University of Udine · ITAREA Science Park · ITArmy Medical University · CNIstituto per il Sistema Produzione Animale in Ambiente Mediterraneo · ITIstituto di Genomica Applicata · ITNational Institutes of Health · USUniversity of Trento · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mammalian apurinic/apyrimidinic endonuclease 1 is a DNA repair enzyme involved in genome stability and expression of genes involved in oxidative stress responses, tumor progression and chemoresistance. However, the molecular mechanisms underlying the role of apurinic/apyrimidinic endonuclease 1 in these processes are still unclear. Recent findings point to a novel role of apurinic/apyrimidinic endonuclease 1 in RNA metabolism. Through the characterization of the interactomes of apurinic/apyrimidinic endonuclease 1 with RNA and other proteins, we demonstrate here a role for apurinic/apyrimidinic endonuclease 1 in pri-miRNA processing and stability via association with the DROSHA-processing complex during genotoxic stress. We also show that endonuclease activity of apurinic/apyrimidinic endonuclease 1 is required for the processing of miR-221/222 in regulating expression of the tumor suppressor PTEN. Analysis of a cohort of different cancers supports the relevance of our findings for tumor biology. We also show that apurinic/apyrimidinic endonuclease 1 participates in RNA-interactomes and protein-interactomes involved in cancer development, thus indicating an unsuspected post-transcriptional effect on cancer genes.APE1 plays an important role in the cellular response to oxidative stress, and mutations are linked to tumor progression and chemoresistance. Here, the authors characterize the interactions of APE1 with RNA and demonstrate a role in microRNA processing.

Indexed as

Brain NeoplasmsBreast NeoplasmsColorectal NeoplasmsDNA-(Apurinic or Apyrimidinic Site) LyaseFemaleGene Expression Regulation, NeoplasticGlioblastomaHCT116 CellsHeLa CellsHumansMaleMCF-7 CellsMicroRNAsNeoplasmsPTEN PhosphohydrolaseReal-Time Polymerase Chain ReactionAPEX1 protein, humanDNA-(Apurinic or Apyrimidinic Site) LyaseMicroRNAsMIR221, humanMIR222, humanPTEN PhosphohydrolasePTEN protein, humanRNA

Identifiers

PMID28986522
PMCPMC5630600
OpenAlexW2761216404

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.