Evidence map›Paper›PMID 28986518›Full record

ArticleNature communications2017

Oxic-anoxic regime shifts mediated by feedbacks between biogeochemical processes and microbial community dynamics.

Timothy Bush, Muhe Diao, Rosalind J Allen, Ruben Sinnige, Gerard Muyzer, Jef Huisman

Abstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Ecosystems as adaptive living circuits.bioRxiv : the preprint server for biology · 2025
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  8. Closed ecosystems extract energy through self-organized nutrient cycles.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Timothy BushDepartment of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, P.O. Box 94248, Amsterdam, 1090 GE, The Netherlands.
Muhe DiaoDepartment of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, P.O. Box 94248, Amsterdam, 1090 GE, The Netherlands.
Rosalind J AllenSUPA, School of Physics and Astronomy, University of Edinburgh, Edinburgh, EN9 3FD, UK.
Ruben SinnigeDepartment of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, P.O. Box 94248, Amsterdam, 1090 GE, The Netherlands.
Gerard MuyzerDepartment of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, P.O. Box 94248, Amsterdam, 1090 GE, The Netherlands. g.muijzer@uva.nl.
Jef HuismanDepartment of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, P.O. Box 94248, Amsterdam, 1090 GE, The Netherlands.

Funding

European Research Council 322551
6 · The paper itself

Abstract

Although regime shifts are known from various ecosystems, the involvement of microbial communities is poorly understood. Here we show that gradual environmental changes induced by, for example, eutrophication or global warming can induce major oxic-anoxic regime shifts. We first investigate a mathematical model describing interactions between microbial communities and biogeochemical oxidation-reduction reactions. In response to gradual changes in oxygen influx, this model abruptly transitions between an oxic state dominated by cyanobacteria and an anoxic state with sulfate-reducing bacteria and phototrophic sulfur bacteria. The model predictions are consistent with observations from a seasonally stratified lake, which shows hysteresis in the transition between oxic and anoxic states with similar changes in microbial community composition. Our results suggest that hysteresis loops and tipping points are a common feature of oxic-anoxic transitions, causing rapid drops in oxygen levels that are not easily reversed, at scales ranging from small ponds to global oceanic anoxic events.The role of microbial communities in regime shifts is poorly understood. Here, the authors use a mathematical model and field data from a seasonally stratified lake to show that gradual environmental changes can induce oxic-anoxic regime shifts mediated by microbial community dynamics and redox processes.

Indexed as

LakesWater MicrobiologyBacteriaChlorobiChromatiaceaeCyanobacteriaEcosystemHypoxiaModels, TheoreticalOxidation-ReductionOxygenOxygen

Identifiers

PMID28986518
PMCPMC5630580

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.