Evidence map›Paper›PMID 28983315›Full record

ArticleFrontiers in genetics2017

Levels of Intra-specific AFLP Diversity in Tuber-Bearing Potato Species with Different Breeding Systems and Ploidy Levels.

Glenn J Bryan, Karen McLean, Robbie Waugh, David M Spooner

Abstract read
In one paragraph

Article in Frontiers in genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. A survey of thePlant direct · 2024
    Article
  2. Article
  3. An overview of remote monitoring methods in biodiversity conservation.Environmental science and pollution research international · 2022
    Review
  4. Amplified Fragment Length Polymorphism: Applications and Recent Developments.Methods in molecular biology (Clifton, N.J.) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Glenn J BryanCell and Molecular Sciences, The James Hutton InstituteInvergowrie Dundee, United Kingdom.
Karen McLeanCell and Molecular Sciences, The James Hutton InstituteInvergowrie Dundee, United Kingdom.
Robbie WaughCell and Molecular Sciences, The James Hutton InstituteInvergowrie Dundee, United Kingdom.
David M SpoonerVegetable Crops Research Unit, Department of Horticulture, United States Department of Agriculture-Agricultural Research Service (USDA-ARS), University of Wisconsin-Madison, MadisonWI, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA-based marker analysis of plant genebank material has become a useful tool in the evaluation of levels of genetic diversity and for the informed use and maintenance of germplasm. In this study, we quantify levels of amplified fragment length polymorphism (AFLP) in representative accessions of wild and cultivated potato species of differing geographic origin, ploidy, and breeding system. We generated 449 polymorphic AFLP fragments in 619 plants, representing multiple plants (16-23) from 17 accessions of 14 potato taxa as well as single plants sampled from available accessions (from 3 to 56) of the same 14 taxa. Intra-accession diversities were compared to those of a synthetic 'taxon-wide' population comprising a single individual from a variable number of available accessions of each sampled taxon. Results confirm the expected considerably lower levels of polymorphism within accessions of self-compatible as compared to self-incompatible taxa. We observed broadly similar levels of 'taxon-wide' polymorphism among self-compatible and self-incompatible species, with self-compatible taxa showing only slightly lower rates of polymorphism. The most diverse accessions were the two cultivated potato accessions examined, the least diverse being the Mexican allohexaploids

Indexed as

AFLPdiversitygenebankpotatoSolanum

Identifiers

PMID28983315
PMCPMC5613152

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