Evidence map›Paper›PMID 28982940›Full record

ArticleEMBO reports2017

JMJD5 cleaves monomethylated histone H3 N-tail under DNA damaging stress.

Jing Shen, Xueping Xiang, Lihan Chen, Haiyi Wang, Li Wu, Yanyun Sun, Li Ma, Xiuting Gu, Hong Liu, Lishun Wang and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. JMJD5: a multifunctional regulator in development, homeostasis, and cancer.Frontiers in cell and developmental biology · 2026
    Review
  6. Article
  7. Histone demethylases in autophagy and inflammation.Cell communication and signaling : CCS · 2025
    Review
  8. Discovery and structural studies of histone demethylases.Frontiers in epigenetics and epigenomics · 2025
    Review
  9. Histone Tail Cleavage as a Mechanism for Epigenetic Regulation.International journal of molecular sciences · 2024
    Review
  10. Versatile JMJD proteins: juggling histones and much more.Trends in biochemical sciences · 2024
    Review
  11. Review
  12. Macrophage-enriched novel functional long noncoding RNAs LRRC75A-AS1 and GAPLINC regulate polarization and innate immune responses.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. JMJD8 Functions as a Novel AKT1 Lysine Demethylase.International journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Jing ShenDepartment of Pathology, Zhejiang University School of Medicine, Hangzhou Zhejiang, China.
Xueping XiangDepartment of Pathology, Zhejiang University School of Medicine, Hangzhou Zhejiang, China.
Lihan ChenInstitute of Health Sciences, Chinese Academy of Sciences-Jiaotong University School of Medicine, Shanghai, China.
Haiyi WangInstitute of Health Sciences, Chinese Academy of Sciences-Jiaotong University School of Medicine, Shanghai, China.
Li WuInstitute of Health Sciences, Chinese Academy of Sciences-Jiaotong University School of Medicine, Shanghai, China.
Yanyun SunInstitute of Health Sciences, Chinese Academy of Sciences-Jiaotong University School of Medicine, Shanghai, China.
Li MaDepartment of Surgery, Brown University School of Medicine-Rhode Island Hospital, Providence, RI, USA.
Xiuting GuInstitute of Health Sciences, Chinese Academy of Sciences-Jiaotong University School of Medicine, Shanghai, China.
Hong LiuDepartment of Pathology, Zhejiang University School of Medicine, Hangzhou Zhejiang, China.
Lishun WangInstitute of Health Sciences, Chinese Academy of Sciences-Jiaotong University School of Medicine, Shanghai, China.
Ying-Nian YuDepartment of Pathology, Zhejiang University School of Medicine, Hangzhou Zhejiang, China.
Jimin ShaoDepartment of Pathology, Zhejiang University School of Medicine, Hangzhou Zhejiang, China shaojimin@zju.edu.cn c_huang_bio@msn.com yechin@sibs.ac.cn.ORCID 0000-0003-4792-5433
Chao HuangInstitute of Health Sciences, Chinese Academy of Sciences-Jiaotong University School of Medicine, Shanghai, China shaojimin@zju.edu.cn c_huang_bio@msn.com yechin@sibs.ac.cn.ORCID 0000-0002-4913-921X
Y Eugene ChinInstitute of Health Sciences, Chinese Academy of Sciences-Jiaotong University School of Medicine, Shanghai, China shaojimin@zju.edu.cn c_huang_bio@msn.com yechin@sibs.ac.cn.ORCID 0000-0002-1687-4023
Shanghai Jiao Tong University · CNZhejiang University · CNBrown University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The histone H3 N-terminal protein domain (N-tail) is regulated by multiple posttranslational modifications, including methylation, acetylation, phosphorylation, and by proteolytic cleavage. However, the mechanism underlying H3 N-tail proteolytic cleavage is largely elusive. Here, we report that JMJD5, a Jumonji C (JmjC) domain-containing protein, is a Cathepsin L-type protease that mediates histone H3 N-tail proteolytic cleavage under stress conditions that cause a DNA damage response. JMJD5 clips the H3 N-tail at the carboxyl side of monomethyl-lysine (Kme1) residues.

Indexed as

DNA DamageA549 CellsAcetylationGene Expression RegulationHistone DemethylasesHistonesHumansMethylationPhosphorylationProtein Processing, Post-TranslationalProteolysisRNA CleavageHistone DemethylasesHistonesKDM8 protein, humanH3K9me1Histone H3JMJD5N‐tail cleavage

Identifiers

PMID28982940
PMCPMC5709736
OpenAlexW2762979444

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.