Evidence map›Paper›PMID 28981879›Full record

ArticleNucleic acids research2017

Activation of a cryptic 5' splice site reverses the impact of pathogenic splice site mutations in the spinal muscular atrophy gene.

Natalia N Singh, José Bruno Del Rio-Malewski, Diou Luo, Eric W Ottesen, Matthew D Howell, Ravindra N Singh

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Pre-mRNA Splicing Modulation by Antisense Oligonucleotides.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. A survey of transcripts generated by spinal muscular atrophy genes.Biochimica et biophysica acta. Gene regulatory mechanisms · 2020
    Review
  15. Review
  16. Review
  17. Therapeutic approaches to treat human spliceosomal diseases.Current opinion in biotechnology · 2019
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Natalia N SinghDepartment of Biomedical Sciences, Iowa State University, Ames, IA 50011, USA.
José Bruno Del Rio-MalewskiDepartment of Biomedical Sciences, Iowa State University, Ames, IA 50011, USA.
Diou LuoDepartment of Biomedical Sciences, Iowa State University, Ames, IA 50011, USA.
Eric W OttesenDepartment of Biomedical Sciences, Iowa State University, Ames, IA 50011, USA.
Matthew D HowellDepartment of Biomedical Sciences, Iowa State University, Ames, IA 50011, USA.
Ravindra N SinghDepartment of Biomedical Sciences, Iowa State University, Ames, IA 50011, USA.
Iowa State University · US

Funding

Splicing Regulation of Spinal Muscular Atrophy GenesR01NS055925 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI SINGH, RAVINDRA N · 2006 to 2023
$5.6M
Dual-masking oligonucleotides as potential therapy of Spinal Muscular AtrophyR21NS101312 · NINDS · IOWA STATE UNIVERSITY · PI SINGH, RAVINDRA N · 2017 to 2018
$419k
NINDS NIH HHS R01 NS055925NINDS NIH HHS R21 NS101312
6 · The paper itself

Abstract

Spinal muscular atrophy (SMA) is caused by deletions or mutations of the Survival Motor Neuron 1 (SMN1) gene coupled with predominant skipping of SMN2 exon 7. The only approved SMA treatment is an antisense oligonucleotide that targets the intronic splicing silencer N1 (ISS-N1), located downstream of the 5' splice site (5'ss) of exon 7. Here, we describe a novel approach to exon 7 splicing modulation through activation of a cryptic 5'ss (Cr1). We discovered the activation of Cr1 in transcripts derived from SMN1 that carries a pathogenic G-to-C mutation at the first position (G1C) of intron 7. We show that Cr1-activating engineered U1 snRNAs (eU1s) have the unique ability to reprogram pre-mRNA splicing and restore exon 7 inclusion in SMN1 carrying a broad spectrum of pathogenic mutations at both the 3'ss and 5'ss of the exon 7. Employing a splicing-coupled translation reporter, we demonstrate that mRNAs generated by an eU1-induced activation of Cr1 produce full-length SMN. Our findings underscore a wider role for U1 snRNP in splicing regulation and reveal a novel approach for the restoration of SMN exon 7 inclusion for a potential therapy of SMA.

Indexed as

MutationRegulatory Sequences, Ribonucleic AcidRNA Splice SitesAnimalsCell Line, TumorCells, CulturedExonsHeterogeneous-Nuclear Ribonucleoprotein Group A-BHumansIntronsMiceMuscular Atrophy, SpinalRibonucleoprotein, U1 Small NuclearRNA, MessengerRNA, Small NuclearRNA SplicingHeterogeneous-Nuclear Ribonucleoprotein Group A-BRegulatory Sequences, Ribonucleic AcidRibonucleoprotein, U1 Small NuclearRNA, MessengerRNA, Small NuclearRNA Splice SitesSMN1 protein, humanSurvival of Motor Neuron 1 ProteinU1 small nuclear RNA

Identifiers

PMID28981879
PMCPMC5716214
OpenAlexW2755565092

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.