Evidence map›Paper›PMID 28981863›Full record

ArticleNucleic acids research2017

Subtelomeres constitute a safeguard for gene expression and chromosome homeostasis.

Sanki Tashiro, Yuki Nishihara, Kazuto Kugou, Kunihiro Ohta, Junko Kanoh

Abstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sanki TashiroInstitute for Protein Research, Osaka University, Suita, Osaka 565-0871, Japan.
Yuki NishiharaInstitute for Protein Research, Osaka University, Suita, Osaka 565-0871, Japan.
Kazuto KugouDepartment of Life Sciences, University of Tokyo, Meguro-ku, Tokyo 153-8902, Japan.
Kunihiro OhtaDepartment of Life Sciences, University of Tokyo, Meguro-ku, Tokyo 153-8902, Japan.
Junko KanohInstitute for Protein Research, Osaka University, Suita, Osaka 565-0871, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The subtelomere, a telomere-adjacent chromosomal domain, contains species-specific homologous DNA sequences, in addition to various genes. However, the functions of subtelomeres, particularly subtelomeric homologous (SH) sequences, remain elusive. Here, we report the first comprehensive analyses of the cellular functions of SH sequences in the fission yeast, Schizosaccharomyces pombe. Complete removal of SH sequences from the genome revealed that they are dispensable for mitosis, meiosis and telomere length control. However, when telomeres are lost, SH sequences prevent deleterious inter-chromosomal end fusion by facilitating intra-chromosomal circularization. Surprisingly, SH-deleted cells sometimes survive telomere loss through inter-chromosomal end fusions via homologous loci such as LTRs, accompanied by centromere inactivation of either chromosome. Moreover, SH sequences function as a buffer region against the spreading of subtelomeric heterochromatin into the neighboring gene-rich regions. Furthermore, we found a nucleosome-free region at the subtelomeric border, which may be a second barrier that blocks heterochromatin spreading into the subtelomere-adjacent euchromatin. Thus, our results demonstrate multiple defense functions of subtelomeres in chromosome homeostasis and gene expression.

Indexed as

Gene ExpressionCentromereChromosomal InstabilityChromosomes, FungalGene Expression Regulation, FungalHeterochromatinHomeostasisOrganisms, Genetically ModifiedSchizosaccharomycesSchizosaccharomyces pombe ProteinsSequence DeletionTelomereTelomere-Binding ProteinsHeterochromatinSchizosaccharomyces pombe ProteinsTelomere-Binding Proteins

Identifiers

PMID28981863
PMCPMC5737222

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.