Evidence map›Paper›PMID 28981783›Full record

ArticleJournal of experimental botany2017

The Arabidopsis WRINKLED1 transcription factor affects auxin homeostasis in roots.

Que Kong, Wei Ma, Haibing Yang, Guojie Ma, Jenny J Mantyla, Christoph Benning

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
11.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
  2. Genome-Wide Identification ofPlants (Basel, Switzerland) · 2025
    Article
  3. Article
  4. Article
  5. Nitrate Starvation Induces Lateral Root Organogenesis inInternational journal of molecular sciences · 2024
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Bioengineering of Soybean Oil and Its Impact on Agronomic Traits.International journal of molecular sciences · 2023
    Review
  13. Review
  14. Article
  15. Potassium Chloroaurate-MediatedNanomaterials (Basel, Switzerland) · 2022
    Article
  16. Article
  17. Cloning and Functional Analysis ofInternational journal of molecular sciences · 2022
    Article
  18. Functional Antagonism of WRI1 and TCP20 ModulatesPlants (Basel, Switzerland) · 2022
    Article
  19. An expanded role for the transcription factorFrontiers in plant science · 2022
    Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Que KongMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA.
Wei MaMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA.
Haibing YangDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907, USA.
Guojie MaDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907, USA.
Jenny J MantylaDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, USA.
Christoph BenningMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA.
Great Lakes Bioenergy Research Center · USPurdue University West Lafayette · USMichigan State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

WRINKLED1 (WRI1) is a key transcriptional regulator of fatty acid biosynthesis genes in diverse oil-containing tissues. Loss of function of Arabidopsis WRI1 leads to a reduction in the expression of genes for fatty acid biosynthesis and glycolysis, and concomitant strong reduction of seed oil content. The wri1-1 loss-of-function mutant shows reduced primary root growth and decreased acidification of the growth medium. The content of a conjugated form of the plant growth hormone auxin, indole-3-acetic acid (IAA)-Asp, was higher in wri1-1 plants compared with the wild-type. GH3.3, a gene encoding an enzyme involved in auxin degradation, displayed higher expression in the wri1-1 mutant. EMSAs demonstrated that AtWRI1 bound to the promoter of GH3.3. Specific AtWRI1-binding motifs were identified in the promoter of GH3.3. In addition, wri1-1 displayed decreased auxin transport. Expression of some PIN genes, which encode IAA carrier proteins, was reduced in wri1-1 plants as well. Correspondingly, AtWRI1 bound to the promoter regions of some PIN genes. It is well known that auxin exerts its maximum effects at a specific, optimal concentration in roots requiring a finely balanced auxin homeostasis. This process appears to be disrupted when the expression of WRI1 and in turn a subset of its target genes are misregulated, highlighting a role for WRI1 in root auxin homeostasis.

Indexed as

ArabidopsisArabidopsis ProteinsBinding SitesBiological TransportGene Expression Regulation, PlantHomeostasisIndoleacetic AcidsMembrane Transport ProteinsMutationPlant RootsPlants, Genetically ModifiedPromoter Regions, GeneticTranscription FactorsArabidopsis ProteinsIndoleacetic AcidsMembrane Transport ProteinsPIN4 protein, ArabidopsisTranscription FactorsWRINKLED1 protein, ArabidopsisArabidopsisauxinDNA-binding motifgene expressionroot developmenttranscription factor

Identifiers

PMID28981783
PMCPMC5853644
OpenAlexW2745675914

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.