Evidence map›Paper›PMID 28981412›Full record

ArticleIEEE transactions on medical imaging2018

A Direct Algorithm for Optimization Problems With the Huber Penalty.

Jingyan Xu, Frederic Noo, Benjamin M W Tsui

Abstract read
In one paragraph

Article in IEEE transactions on medical imaging, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

3 authors.

Jingyan Xu
Frederic Noo
Benjamin M W Tsui

Funding

Novel Reconstruction Paradigm for Multiphasic CT Imaging of Kidney CancerR21CA211035 · NCI · UNIVERSITY OF UTAH · PI NOO, FREDERIC, XU, JINGYAN · 2017 to 2018
$386k
NCI NIH HHS R21 CA211035
6 · The paper itself

Abstract

We present a direct (noniterative) algorithm for 1-D quadratic data fitting with neighboring intensity differences penalized by the Huber function. Applications of such an algorithm include 1-D processing of medical signals, such as smoothing of tissue time concentration curves in kinetic data analysis or sinogram preprocessing, and using it as a subproblem solver for 2-D or 3-D image restoration and reconstruction. dynamic programming was used to develop the direct algorithm. The problem was reformulated as a sequence of univariate optimization problems, for , where is the number of data points. The solution to the univariate problem at index is parameterized by the solution at , except at . Solving the univariate optimization problem at yields the solution to each problem in the sequence using back-tracking. Computational issues and memory cost are discussed in detail. Two numerical studies, tissue concentration curve smoothing and sinogram preprocessing for image reconstruction, are used to validate the direct algorithm and illustrate its practical applications. In the example of 1-D curve smoothing, the efficiency of the direct algorithm is compared with four iterative methods: the iterative coordinate descent, Nesterov's accelerated gradient descent algorithm, FISTA, and an off-the-shelf second order method. The first two methods were applied to the primal problem, the others to the dual problem. The comparisons show that the direct algorithm outperforms all other methods by a significant factor, which rapidly grows with the curvature of the Huber function. The second example, sinogram preprocessing, showed that robustness and speed of the direct algorithm are maintained over a wide range of signal variations, and that noise and streaking artifacts could be reduced with almost no increase in computation time. We also outline how the proposed 1-D solver can be used for imaging applications.

Indexed as

AlgorithmsAbdomenHumansImage Processing, Computer-AssistedModels, StatisticalPhantoms, ImagingSignal Processing, Computer-Assisted

Identifiers

PMID28981412
PMCPMC5779867

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.