Evidence map›Paper›PMID 28980874›Full record

ArticleCell cycle (Georgetown, Tex.)2017

Analysis of co-expression networks for circular RNAs and mRNAs reveals that circular RNAs hsa_circ_0047905, hsa_circ_0138960 and has-circRNA7690-15 are candidate oncogenes in gastric cancer.

Zhiyong Lai, Yang Yang, Yichao Yan, Tao Li, Yansen Li, Zhu Wang, Zhanlong Shen, Yingjiang Ye, Kewei Jiang, Shan Wang

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 38 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 2 pooled it
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 2 syntheses or guidelines pooled it, 69 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Gastric Cancer Growth Modulated by circSNTB2/miR-6938-5p/G0S2 and PDCD4.Combinatorial chemistry & high throughput screening · 2023
    Article
  9. Article
  10. Expression Profile Analysis of Circular RNAs in Leishmaniasis.Tropical medicine and infectious disease · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. CircRNA: a rising star in gastric cancer.Cellular and molecular life sciences : CMLS · 2020
    Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Zhiyong Laia Department of Gastroenterological Surgery , Laboratory of Surgical Oncology , Beijing Key Laboratory of Colorectal Cancer Diagnosis and Treatment Research , Peking University People's Hospital , No.11 Xizhimen South Street, Xicheng District, Beijing , People's Republic of China.
Yang Yangb Department of Breast Center , Peking University People's Hospital , No.11 Xizhimen South Street, Xicheng District, Beijing , People's Republic of China.
Yichao Yanc Department of Gastroenterological Surgery , Peking University International Hospital , No.1 Life Park Road, Life Science Park of Zhong Guancun, Changping District, Beijing , People's Republic of China.
Tao Lia Department of Gastroenterological Surgery , Laboratory of Surgical Oncology , Beijing Key Laboratory of Colorectal Cancer Diagnosis and Treatment Research , Peking University People's Hospital , No.11 Xizhimen South Street, Xicheng District, Beijing , People's Republic of China.
Yansen Lia Department of Gastroenterological Surgery , Laboratory of Surgical Oncology , Beijing Key Laboratory of Colorectal Cancer Diagnosis and Treatment Research , Peking University People's Hospital , No.11 Xizhimen South Street, Xicheng District, Beijing , People's Republic of China.
Zhu Wanga Department of Gastroenterological Surgery , Laboratory of Surgical Oncology , Beijing Key Laboratory of Colorectal Cancer Diagnosis and Treatment Research , Peking University People's Hospital , No.11 Xizhimen South Street, Xicheng District, Beijing , People's Republic of China.
Zhanlong Shena Department of Gastroenterological Surgery , Laboratory of Surgical Oncology , Beijing Key Laboratory of Colorectal Cancer Diagnosis and Treatment Research , Peking University People's Hospital , No.11 Xizhimen South Street, Xicheng District, Beijing , People's Republic of China.
Yingjiang Yea Department of Gastroenterological Surgery , Laboratory of Surgical Oncology , Beijing Key Laboratory of Colorectal Cancer Diagnosis and Treatment Research , Peking University People's Hospital , No.11 Xizhimen South Street, Xicheng District, Beijing , People's Republic of China.
Kewei Jianga Department of Gastroenterological Surgery , Laboratory of Surgical Oncology , Beijing Key Laboratory of Colorectal Cancer Diagnosis and Treatment Research , Peking University People's Hospital , No.11 Xizhimen South Street, Xicheng District, Beijing , People's Republic of China.
Shan Wanga Department of Gastroenterological Surgery , Laboratory of Surgical Oncology , Beijing Key Laboratory of Colorectal Cancer Diagnosis and Treatment Research , Peking University People's Hospital , No.11 Xizhimen South Street, Xicheng District, Beijing , People's Republic of China.
Peking University · CNPeking University People's Hospital · CNPeking University International Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accumulating evidence has suggested that circular RNAs (circRNAs) play important roles in oncogenesis and tumor progression. However, our knowledge of circRNAs in gastric cancer (GC) remains limited. To investigate circRNAs involved in GC oncogenesis, we examined differentially-expressed circRNAs and mRNAs in GC tissues and paired noncancerous mucosa tissues using circRNA and mRNA microarrays. Next, we built gene co-expression networks according to the degree of correlation to predict the critical circRNAs in GC. Through bioinformatics analysis, we observed three newly identified circRNAs that are substantially upregulated in GC: hsa_circ_0047905, hsa_circ_0138960 and has-circRNA7690-15. Additionally, hsa_circ_0047905 and hsa_circ_0138960 positively correlated with their parental gene mRNA. Knockdown of hsa_circ_0047905, hsa_circ_0138960 and has-circRNA7690-15 in GC cells, resulted in downregulation of parental gene expression. Functional assays suggested that inhibition of these three circular RNAs suppresses GC cell proliferation and invasion in vitro. Those findings suggest that hsa_circ_0047905, hsa_circ_0138960 and has-circRNA7690-15 might act as tumor promoters in the pathogenesis of gastric cancer.

Indexed as

Area Under CurveBiomarkers, TumorCell Line, TumorCell MovementCell ProliferationDown-RegulationGene Expression ProfilingGene Regulatory NetworksGuanine DeaminaseHumansRNARNA, CircularRNA InterferenceRNA, MessengerRNA, Small InterferingROC CurveBiomarkers, TumorGDA protein, humanGuanine DeaminaseRNARNA, CircularRNA, MessengerRNA, Small InterferingSERPIN-B5SerpinsCircular RNAgastric cancerGDAoncogenesisSERPINB5

Identifiers

PMID28980874
PMCPMC5788484
OpenAlexW2764260763

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.