Evidence map›Paper›PMID 28977617›Full record

ArticleNucleic acids research2017

Structural insights into species-specific features of the ribosome from the human pathogen Mycobacterium tuberculosis.

Kailu Yang, Jeng-Yih Chang, Zhicheng Cui, Xiaojun Li, Ran Meng, Lijun Duan, Jirapat Thongchol, Joanita Jakana, Christoph M Huwe, James C Sacchettini and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
  2. Review
  3. Heterologous Substitution ofAntibiotics (Basel, Switzerland) · 2025
    Article
  4. Review
  5. Article
  6. HflX-mediated drug resistance through ribosome splitting and rRNA disordering in mycobacteria.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. The Structural and Molecular Mechanisms ofMolecules (Basel, Switzerland) · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Structural conservation of antibiotic interaction with ribosomes.Nature structural & molecular biology · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Cryo-EM structure ofEmerging microbes & infections · 2022
    Article
  18. 50S subunit recognition and modification by theProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Kailu YangDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Jeng-Yih ChangDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Zhicheng CuiDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Xiaojun LiDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Ran MengDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Lijun DuanDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Jirapat ThongcholDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Joanita JakanaNational Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Christoph M HuweBayer AG Pharmaceuticals, Global External Innovation & Alliances, 13342 Berlin, Germany.
James C SacchettiniDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Junjie ZhangDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Texas A&M University · USBayer (Germany) · DEBaylor College of Medicine · US

Funding

CryoEM Data Collection Facility Consortium at NCMIU24GM116787 · NIGMS · STANFORD UNIVERSITY · PI BULLITT, ESTHER, CHIU, WAH · 2016 to 2020
$3.1M
NIGMS NIH HHS U24 GM116787
6 · The paper itself

Abstract

Ribosomes from Mycobacterium tuberculosis (Mtb) possess species-specific ribosomal RNA (rRNA) expansion segments and ribosomal proteins (rProtein). Here, we present the near-atomic structures of the Mtb 50S ribosomal subunit and the complete Mtb 70S ribosome, solved by cryo-electron microscopy. Upon joining of the large and small ribosomal subunits, a 100-nt long expansion segment of the Mtb 23S rRNA, named H54a or the 'handle', switches interactions from with rRNA helix H68 and rProtein uL2 to with rProtein bS6, forming a new intersubunit bridge 'B9'. In Mtb 70S, bridge B9 is mostly maintained, leading to correlated motions among the handle, the L1 stalk and the small subunit in the rotated and non-rotated states. Two new protein densities were discovered near the decoding center and the peptidyl transferase center, respectively. These results provide a structural basis for studying translation in Mtb as well as developing new tuberculosis drugs.

Indexed as

Cryoelectron MicroscopyModels, MolecularMotionMycobacterium smegmatisMycobacterium tuberculosisProtein Synthesis InhibitorsRibosomal ProteinsRibosomesRibosome Subunits, Large, BacterialSpecies SpecificityProtein Synthesis InhibitorsRibosomal Proteins

Identifiers

PMID28977617
PMCPMC5737476
OpenAlexW2751932844

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.