Evidence map›Paper›PMID 28977491›Full record

ArticleNucleic acids research2017

p53 controls expression of the DNA deaminase APOBEC3B to limit its potential mutagenic activity in cancer cells.

Manikandan Periyasamy, Anup K Singh, Carolina Gemma, Christian Kranjec, Raed Farzan, Damien A Leach, Naveenan Navaratnam, Hajnalka L Pálinkás, Beata G Vértessy, Tim R Fenton and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
  2. Journal of virology · 2026
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  14. Clinical Implications of APOBEC3-Mediated Mutagenesis in Breast Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Review
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Manikandan PeriyasamyDepartment of Surgery & Cancer, Imperial College London, Hammersmith Hospital Campus, London W12 0NN, UK.
Anup K SinghDepartment of Surgery & Cancer, Imperial College London, Hammersmith Hospital Campus, London W12 0NN, UK.
Carolina GemmaDepartment of Surgery & Cancer, Imperial College London, Hammersmith Hospital Campus, London W12 0NN, UK.
Christian KranjecDepartment of Pathology, University of Cambridge, Tennis Court Road, Cambridge CB2 1QP, UK.
Raed FarzanDepartment of Surgery & Cancer, Imperial College London, Hammersmith Hospital Campus, London W12 0NN, UK.
Damien A LeachDepartment of Surgery & Cancer, Imperial College London, Hammersmith Hospital Campus, London W12 0NN, UK.
Naveenan NavaratnamMRC London Institute of Medical Sciences, Imperial College London, Hammersmith Hospital Campus, Du Cane Road, London W12 0NN, UK.
Hajnalka L PálinkásDepartment of Applied Biotechnology and Food Science, Budapest University of Technology and Economics, Budapest 1111, Hungary.
Beata G VértessyDepartment of Applied Biotechnology and Food Science, Budapest University of Technology and Economics, Budapest 1111, Hungary.
Tim R FentonSchool of Biosciences, University of Kent, Canterbury, Kent CT2 7NJ, UK.
John DoorbarDepartment of Pathology, University of Cambridge, Tennis Court Road, Cambridge CB2 1QP, UK.
Frances Fuller-PaceDivision of Cancer Research, University of Dundee, Ninewells Hospital and Medical School, Dundee DD1 9SY, UK.
David W MeekDivision of Cancer Research, University of Dundee, Ninewells Hospital and Medical School, Dundee DD1 9SY, UK.
R Charles CoombesDepartment of Surgery & Cancer, Imperial College London, Hammersmith Hospital Campus, London W12 0NN, UK.
Laki BuluwelaDepartment of Surgery & Cancer, Imperial College London, Hammersmith Hospital Campus, London W12 0NN, UK.
Simak AliDepartment of Surgery & Cancer, Imperial College London, Hammersmith Hospital Campus, London W12 0NN, UK.
Hammersmith Hospital · GBBudapest University of Technology and Economics · HUUniversity of Cambridge · GBUniversity of Dundee · GBUniversity of Kent · GB

Funding

Breast Cancer Now 2010NOVPR16Cancer Research UK 12011Cancer Research UK 13392Cancer Research UK 18784Medical Research Council MC_PC_13050
6 · The paper itself

Abstract

Cancer genome sequencing has implicated the cytosine deaminase activity of apolipoprotein B mRNA editing enzyme catalytic polypeptide-like (APOBEC) genes as an important source of mutations in diverse cancers, with APOBEC3B (A3B) expression especially correlated with such cancer mutations. To better understand the processes directing A3B over-expression in cancer, and possible therapeutic avenues for targeting A3B, we have investigated the regulation of A3B gene expression. Here, we show that A3B expression is inversely related to p53 status in different cancer types and demonstrate that this is due to a direct and pivotal role for p53 in repressing A3B expression. This occurs through the induction of p21 (CDKN1A) and the recruitment of the repressive DREAM complex to the A3B gene promoter, such that loss of p53 through mutation, or human papilloma virus-mediated inhibition, prevents recruitment of the complex, thereby causing elevated A3B expression and cytosine deaminase activity in cancer cells. As p53 is frequently mutated in cancer, our findings provide a mechanism by which p53 loss can promote cancer mutagenesis.

Indexed as

Gene Expression Regulation, NeoplasticCell LineCyclin-Dependent Kinase Inhibitor p21Cytidine DeaminaseHCT116 CellsHumansImmunoblottingMinor Histocompatibility AntigensMutationNeoplasmsReverse Transcriptase Polymerase Chain ReactionRNA InterferenceTumor Suppressor Protein p53APOBEC3B protein, humanCyclin-Dependent Kinase Inhibitor p21Cytidine DeaminaseMinor Histocompatibility AntigensTumor Suppressor Protein p53

Identifiers

PMID28977491
PMCPMC5737468
OpenAlexW2750193796

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.