Evidence map›Paper›PMID 28977039›Full record

ArticlePloS one2017

Host transcriptional responses following ex vivo re-challenge with Mycobacterium tuberculosis vary with disease status.

Elaine A Yu, Serene H John, Elizabeth C Tablante, Christine A King, John Kenneth, David G Russell, Saurabh Mehta

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Elaine A YuDivision of Nutritional Sciences, Cornell University, Ithaca, New York, United States.
Serene H JohnDivision of Infectious Diseases, St. John's Research Institute, Bangalore, Karnataka, India.
Elizabeth C TablanteDivision of Nutritional Sciences, Cornell University, Ithaca, New York, United States.
Christine A KingDepartment of Microbiology and Immunology, State University of New York Upstate Medical University, Syracuse, New York, United States.
John KennethDivision of Infectious Diseases, St. John's Research Institute, Bangalore, Karnataka, India.
David G RussellDepartment of Microbiology and Immunology, College of Veterinary Medicine, Cornell University, Ithaca, New York, United States.
Saurabh MehtaDivision of Nutritional Sciences, Cornell University, Ithaca, New York, United States.ORCID http://orcid.org/0000-0003-3788-0665
Cornell University · USSt.John's Medical College Hospital · INSUNY Upstate Medical University · US

Funding

NUTRITION TRAININGT32DK007158 · NIDDK · CORNELL UNIVERSITY ITHACA · PI PATRICIA A CASSANO, Julia L. Finkelstein · 1986 to 2026
$7.4M
How does HIV lead to increased susceptibility to tuberculosis?R01AI118582 · NIAID · CORNELL UNIVERSITY · PI RUSSELL, DAVID G · 2015 to 2019
$2.8M
NIAID NIH HHS R01 AI118582NIDDK NIH HHS T32 DK007158
6 · The paper itself

Abstract

The identification of immune correlates that are predictive of disease outcome for tuberculosis remains an ongoing challenge. To address this issue, we evaluated gene expression profiles from peripheral blood mononuclear cells following ex vivo challenge with Mycobacterium tuberculosis, among participants with active TB disease (ATBD, n = 10), latent TB infection (LTBI, n = 10), and previous active TB disease (after successful treatment; PTBD, n = 10), relative to controls (n = 10). Differential gene expression profiles were assessed by suppression-subtractive hybridization, dot blot, real-time polymerase chain reaction, and the comparative cycle threshold methods. Comparing ATBD to control samples, greater fold-increases of gene expression were observed for a number of chemotactic factors (CXCL1, CXCL3, IL8, MCP1, MIP1α). ATBD was also associated with higher IL1B gene expression, relative to controls. Among LTBI samples, gene expression of several chemotactic factors (CXCL2, CXCL3, IL8) was similarly elevated, compared to individuals with PTBD. Our results demonstrated that samples from participants with ATBD and LTBI have distinct gene expression profiles in response to ex vivo M. tuberculosis infection. These findings indicate the value in further characterizing the peripheral responses to M. tuberculosis challenge as a route to defining immune correlates of disease status or outcome.

Indexed as

Transcription, GeneticAdultCytokinesFemaleHumansMaleMycobacterium tuberculosisReal-Time Polymerase Chain ReactionTuberculosisCytokines

Identifiers

PMID28977039
PMCPMC5627917
OpenAlexW2760286718

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.