Evidence map›Paper›PMID 28976110›Full record

ArticleMolecular plant pathology2018

A mutation in an exoglucanase of Xanthomonas oryzae pv. oryzae, which confers an endo mode of activity, affects bacterial virulence, but not the induction of immune responses, in rice.

Lavanya Tayi, Sushil Kumar, Rajkanwar Nathawat, Asfarul S Haque, Roshan V Maku, Hitendra Kumar Patel, Rajan Sankaranarayanan, Ramesh V Sonti

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Searching for the Virulence-contributing Genes of thePathogens (Basel, Switzerland) · 2024
    Article
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  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Lavanya TayiCSIR-Centre for Cellular and Molecular Biology, Hyderabad 500007, India.
Sushil KumarCSIR-Centre for Cellular and Molecular Biology, Hyderabad 500007, India.
Rajkanwar NathawatCSIR-Centre for Cellular and Molecular Biology, Hyderabad 500007, India.
Asfarul S HaqueCSIR-Centre for Cellular and Molecular Biology, Hyderabad 500007, India.
Roshan V MakuCSIR-Centre for Cellular and Molecular Biology, Hyderabad 500007, India.
Hitendra Kumar PatelCSIR-Centre for Cellular and Molecular Biology, Hyderabad 500007, India.
Rajan SankaranarayananCSIR-Centre for Cellular and Molecular Biology, Hyderabad 500007, India.
Ramesh V SontiCSIR-Centre for Cellular and Molecular Biology, Hyderabad 500007, India.
Centre for Cellular and Molecular Biology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Xanthomonas oryzae pv. oryzae (Xoo) causes bacterial blight, a serious disease of rice. Xoo secretes a repertoire of cell wall-degrading enzymes, including cellulases, xylanases and pectinases, to degrade various polysaccharide components of the rice cell wall. A secreted Xoo cellulase, CbsA, is not only a key virulence factor of Xoo, but is also a potent inducer of innate immune responses of rice. In this study, we solved the crystal structure of the catalytic domain of the CbsA protein to a resolution of 1.86 Å. The core structure of CbsA shows a central distorted TIM barrel made up of eight β strands with N- and C-terminal loops enclosing the active site, which is a characteristic structural feature of an exoglucanase. The aspartic acid at the 131st position of CbsA was predicted to be important for catalysis and was therefore mutated to alanine to study its role in the catalysis and biological functions of CbsA. Intriguingly, the D131A CbsA mutant protein displayed the enzymatic activity of a typical endoglucanase. D131A CbsA was as proficient as wild-type (Wt) CbsA in inducing rice immune responses, but was deficient in virulence-promoting activity. This indicates that the specific exoglucanase activity of the Wt CbsA protein is required for this protein to promote the growth of Xoo in rice.

Indexed as

CellulasesGene Expression Regulation, BacterialMutationOryzaPlant DiseasesVirulenceXanthomonasCellulasescellulasesendoglucanaseexoglucanasericeXanthomonas oryzae pv. oryzae

Identifiers

PMID28976110
PMCPMC6638110
OpenAlexW2762626014

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.