Evidence map›Paper›PMID 28975457›Full record

ArticleThe protein journal2017

Characterization of a Novel Alkalophilic Lipase From Aneurinibacillus thermoaerophilus: Lid Heterogeneity and Assignment to Family I.5.

Ximena Zottig, Fatma Meddeb-Mouelhi, David M Charbonneau, Marc Beauregard

Abstract read
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In one paragraph

Article in The protein journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Supramolecular Ionic Liquid Gels for Enzyme Entrapment.ACS sustainable chemistry & engineering · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ximena ZottigDépartement de chimie, biochimie et physique, Université du Québec Trois-Rivières, 3351 Boul. Des Forges, C.P. 500, Trois-Rivières, Québec, G9A 5H7, Canada.
Fatma Meddeb-MouelhiDépartement de chimie, biochimie et physique, Université du Québec Trois-Rivières, 3351 Boul. Des Forges, C.P. 500, Trois-Rivières, Québec, G9A 5H7, Canada.
David M CharbonneauDépartement de chimie, Université de Montréal, C.P. 6128 Succ. Centre-Ville, Montreal, Canada.
Marc BeauregardDépartement de chimie, biochimie et physique, Université du Québec Trois-Rivières, 3351 Boul. Des Forges, C.P. 500, Trois-Rivières, Québec, G9A 5H7, Canada. marc.beauregard@uqtr.ca.ORCID 0000-0002-4848-728X
Université Laval · CAUniversité de Montréal · CA

Funding

Natural Sciences and Engineering Research Council of Canada 138654
6 · The paper itself

Abstract

Recent investigations of Aneurinibacillus thermoaerophilus strains have allowed identification of a unique solvent tolerant lipase, distinct from known lipases. This work reports the expression and purification of this lipase (LipAT) and the first characterization of its structure and temperature and pH-dependent behaviour. LipAT has a secondary structural content compatible with the canonical lipase α/β hydrolase fold, and is dimeric at neutral pH. The protein was folded from pH 5 to 10, and association into folded aggregates at pH 7 and 8 likely protected its secondary structures from thermal unfolding. The enzyme was active from 25 to 65 °C under neutral pH, but its maximal activity was detected at pH 10 and 45 °C. The ability of LipAT to recover from high temperature was investigated. Heating at 70 °C and pH 10 followed by cooling prevented the restoration of activity, while similar treatments performed at pH 8 (where folded aggregates may form) allowed recovery of 50% of the initial activity. In silico analyses revealed a high conservation (85% or more) for the main lipase signature sequences in LipAT despite an overall low residue identity (60% identity compared to family I.5 lipases). In contrast, the active site lid region in LipAT is very distinct showing only 25% amino acid sequence identity to other homologous lipases in this region. Comparison of lids among lipases from the I.5 family members and LipAT reveals that this region should be a primary target for elucidation, optimisation and prediction of structure-function relationships in lipases.

Indexed as

BacillalesBacterial ProteinsBiofuelsEscherichia coliLipaseModels, MolecularRecombinant ProteinsBacterial ProteinsBiofuelsLipaseRecombinant ProteinsAlkalophilic lipaseAneurinibacillus thermoaerophilusBiodiesel synthesisEnzyme activityIndustrial applicationsStructure

Identifiers

PMID28975457
OpenAlexW2763787159

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.