Evidence map›Paper›PMID 28974674›Full record

ArticleNature communications2017

Insights into beta cell regeneration for diabetes via integration of molecular landscapes in human insulinomas.

Huan Wang, Aaron Bender, Peng Wang, Esra Karakose, William B Inabnet, Steven K Libutti, Andrew Arnold, Luca Lambertini, Micheal Stang, Herbert Chen and 19 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed, 1 pooled it
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 1 synthesis or guideline pooled it, 87 citations in OpenAlex.

  1. Pooled it
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  5. Review
  6. Article
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  11. Review
  12. Review
  13. Approach to the Patient: Insulinoma.The Journal of clinical endocrinology and metabolism · 2024
    Article
  14. Article
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  17. Review
  18. GNature communications · 2022
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

29 authors at 9 institutions in 2 countries.

Huan WangThe Department of Genetics and Genomic Sciences and The Icahn Institute for Genomics and Multiscale Biology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Aaron BenderThe Graduate School, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Peng WangThe Diabetes Obesity and Metabolism Institute, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Esra KarakoseThe Diabetes Obesity and Metabolism Institute, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
William B InabnetThe Department of Surgery, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Steven K LibuttiThe Cancer Institute of New Jersey, Rutgers University, New Brunswick, NJ, 08901, USA.
Andrew ArnoldCenter for Molecular Medicine, University of Connecticut School of Medicine, Farmington, CT, 06030, USA.
Luca LambertiniThe Departments of Environmental Medicine and Public Health and Obstetrics, Gynecology, and Reproductive Sciences, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Micheal StangThe Department of Surgery, Duke University School of Medicine, Durham, NC, 27710, USA.
Herbert ChenThe Department of Surgery, University of Alabama at Birmingham, Birmingham, AL, 35233, USA.
Yumi KasaiThe New York Genome Center, New York, NY, 10013, USA.
Milind MahajanThe Department of Genetics and Genomic Sciences and The Icahn Institute for Genomics and Multiscale Biology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Yayoi KinoshitaThe Department of Pathology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Gustavo Fernandez-RanvierThe Department of Surgery, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Thomas C BeckerThe Sarah W. Stedman Center for Nutrition and Metabolism, Duke University School of Medicine, Durham, NC, 27710, USA.
Karen K TakaneThe Diabetes Obesity and Metabolism Institute, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.ORCID http://orcid.org/0000-0002-5024-0315
Laura A WalkerThe Diabetes Obesity and Metabolism Institute, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Shira SaulThe Diabetes Obesity and Metabolism Institute, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.ORCID http://orcid.org/0000-0003-0931-0948
Rong ChenThe Department of Genetics and Genomic Sciences and The Icahn Institute for Genomics and Multiscale Biology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Donald K ScottThe Diabetes Obesity and Metabolism Institute, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Jorge FerrerThe Department of Genetics in Medicine, Imperial College, London, W12 0NN, UK.ORCID http://orcid.org/0000-0002-5959-5729
Yevgeniy AntipinThe Department of Genetics and Genomic Sciences and The Icahn Institute for Genomics and Multiscale Biology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Michael DonovanThe Department of Pathology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Andrew V UzilovThe Department of Genetics and Genomic Sciences and The Icahn Institute for Genomics and Multiscale Biology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Boris RevaThe Department of Genetics and Genomic Sciences and The Icahn Institute for Genomics and Multiscale Biology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Eric E SchadtThe Department of Genetics and Genomic Sciences and The Icahn Institute for Genomics and Multiscale Biology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.ORCID http://orcid.org/0000-0002-7892-8808
Bojan LosicThe Department of Genetics and Genomic Sciences and The Icahn Institute for Genomics and Multiscale Biology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Carmen ArgmannThe Department of Genetics and Genomic Sciences and The Icahn Institute for Genomics and Multiscale Biology, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Andrew F StewartThe Diabetes Obesity and Metabolism Institute, The Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA. andrew.stewart@mssm.edu.
Icahn School of Medicine at Mount Sinai · USSema4 (United States) · USDuke University · USThe Graduate Center, CUNY · USImperial College London · GBNew York Genome Center · USRutgers, The State University of New Jersey · USUniversity of Alabama at Birmingham · USUniversity of Connecticut · US

Funding

Vanderbilt Diabetes Research CenterP30DK020593 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI OWEN P MCGUINNESS · 2012 to 2026
$29.3M
Translational Research CoreP30DK020541 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI STREAMSON C CHUA · 2015 to 2026
$27.7M
University of Alabama at Birmingham's Diabetes Research CenterP30DK079626 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Kirk Michael Habegger · 2013 to 2026
$19.5M
DYRK Inhibitors for Human Beta Cell ExpansionR01DK105015 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI DEVITA, ROBERT J, GARCIA-OCANA, ADOLFO · 2016 to 2024
$4.9M
Molecular Mechanisms of Physiologic Beta Cell Growth in Juvenile Human PancreasUC4DK104211 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KIM, SEUNG K, POWERS, ALVIN C · 2014 to 2015
$4.0M
Epigenetic Control of Human Beta Cell ProliferationR01DK116873 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ARGMANN, CARMEN, SCOTT, DONALD K. · 2018 to 2022
$3.2M
Medical Research Council MR/L02036X/1NIDDK NIH HHS P30 DK020541NIDDK NIH HHS P30 DK020593NIDDK NIH HHS P30 DK079626NIDDK NIH HHS R01 DK105015NIDDK NIH HHS R01 DK116873NIDDK NIH HHS UC4 DK104211
6 · The paper itself

Abstract

Although diabetes results in part from a deficiency of normal pancreatic beta cells, inducing human beta cells to regenerate is difficult. Reasoning that insulinomas hold the "genomic recipe" for beta cell expansion, we surveyed 38 human insulinomas to obtain insights into therapeutic pathways for beta cell regeneration. An integrative analysis of whole-exome and RNA-sequencing data was employed to extensively characterize the genomic and molecular landscape of insulinomas relative to normal beta cells. Here, we show at the pathway level that the majority of the insulinomas display mutations, copy number variants and/or dysregulation of epigenetic modifying genes, most prominently in the polycomb and trithorax families. Importantly, these processes are coupled to co-expression network modules associated with cell proliferation, revealing candidates for inducing beta cell regeneration. Validation of key computational predictions supports the concept that understanding the molecular complexity of insulinoma may be a valuable approach to diabetes drug discovery.Diabetes results in part from a deficiency of functional pancreatic beta cells. Here, the authors study the genomic and epigenetic landscapes of human insulinomas to gain insight into possible pathways for therapeutic beta cell regeneration, highlighting epigenetic genes and pathways.

Indexed as

AdolescentAdultAgedAged, 80 and overCell ProliferationDiabetes Mellitus, Type 1Epigenesis, GeneticFemaleGene Expression Regulation, NeoplasticHumansInsulinomaInsulin-Secreting CellsMaleMiddle AgedPancreatic NeoplasmsRegeneration

Identifiers

PMID28974674
PMCPMC5626682
OpenAlexW2758796044

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.