Evidence map›Paper›PMID 28973938›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Interhost dispersal alters microbiome assembly and can overwhelm host innate immunity in an experimental zebrafish model.

Adam R Burns, Elizabeth Miller, Meghna Agarwal, Annah S Rolig, Kathryn Milligan-Myhre, Steve Seredick, Karen Guillemin, Brendan J M Bohannan

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed.

  1. Article
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  7. Quantitative genetics of microbiome-mediated traits.Evolution; international journal of organic evolution · 2025
    Article
  8. Article
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  10. DRIVERS OF VARIATION OF THE ZEBRAFISH EGG MICROBIOME.bioRxiv : the preprint server for biology · 2025
    Article
  11. Review
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39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Adam R BurnsInstitute of Ecology and Evolution, University of Oregon, Eugene, OR 97403; adburns@stanford.edu.ORCID 0000-0002-8402-598X
Elizabeth MillerInstitute of Ecology and Evolution, University of Oregon, Eugene, OR 97403.
Meghna AgarwalInstitute of Molecular Biology, University of Oregon, Eugene, OR 97403.
Annah S RoligInstitute of Molecular Biology, University of Oregon, Eugene, OR 97403.
Kathryn Milligan-MyhreBiological Sciences, University of Alaska Anchorage, Anchorage, AK 99508.
Steve SeredickInstitute of Neuroscience, University of Oregon, Eugene, OR 97403.
Karen GuilleminInstitute of Molecular Biology, University of Oregon, Eugene, OR 97403.
Brendan J M BohannanInstitute of Ecology and Evolution, University of Oregon, Eugene, OR 97403.

Funding

Zebrafish FacilityP01HD022486 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 1987 to 2017
$28.8M
Research Area IIIP50GM098911 · NIGMS · UNIVERSITY OF OREGON · PI PARTHASARATHY, RAGHUVEER · 2012 to 2016
$9.8M
Microbial Ecology of the Zebrafish IntestineR01GM095385 · NIGMS · UNIVERSITY OF OREGON · PI BOHANNAN, BRENDAN, GUILLEMIN, KAREN J · 2011 to 2014
$1.4M
NICHD NIH HHS P01 HD022486NIGMS NIH HHS P50 GM098911NIGMS NIH HHS R01 GM095385
6 · The paper itself

Abstract

The diverse collections of microorganisms associated with humans and other animals, collectively referred to as their "microbiome," are critical for host health, but the mechanisms that govern their assembly are poorly understood. This has made it difficult to identify consistent host factors that explain variation in microbiomes across hosts, despite large-scale sampling efforts. While ecological theory predicts that the movement, or dispersal, of individuals can have profound and predictable consequences on community assembly, its role in the assembly of animal-associated microbiomes remains underexplored. Here, we show that dispersal of microorganisms among hosts can contribute substantially to microbiome variation, and is able to overwhelm the effects of individual host factors, in an experimental test of ecological theory. We manipulated dispersal among wild-type and immune-deficient

Indexed as

Animal DistributionGastrointestinal MicrobiomeImmunity, InnateAnimalsAnimals, Genetically ModifiedMyeloid Differentiation Factor 88ZebrafishZebrafish ProteinsMyD88 protein, zebrafishMyeloid Differentiation Factor 88Zebrafish Proteinsdispersalinnate immunitymetacommunitymicrobiomezebrafish

Identifiers

PMID28973938
PMCPMC5651736

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.