Evidence map›Paper›PMID 28973455›Full record

ArticleNucleic acids research2017

Structural insights of lincosamides targeting the ribosome of Staphylococcus aureus.

Donna Matzov, Zohar Eyal, Raphael I Benhamou, Moran Shalev-Benami, Yehuda Halfon, Miri Krupkin, Ella Zimmerman, Haim Rozenberg, Anat Bashan, Micha Fridman and 1 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Clindamycin: A Comprehensive Status Report with Emphasis on Use in Dermatology.The Journal of clinical and aesthetic dermatology · 2024
    Review
  7. Review
  8. Review
  9. One-pot chemoenzymatic syntheses of non-canonical amino acids.Journal of industrial microbiology & biotechnology · 2024
    Review
  10. Structural conservation of antibiotic interaction with ribosomes.Nature structural & molecular biology · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Donna MatzovDepartment of Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Zohar EyalDepartment of Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Raphael I BenhamouSchool of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 6997801, Israel.
Moran Shalev-BenamiDepartment of Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Yehuda HalfonDepartment of Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Miri KrupkinDepartment of Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Ella ZimmermanDepartment of Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Haim RozenbergDepartment of Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Anat BashanDepartment of Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Micha FridmanSchool of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 6997801, Israel.
Ada YonathDepartment of Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Weizmann Institute of Science · ILTel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antimicrobial resistance within a wide range of pathogenic bacteria is an increasingly serious threat to global public health. Among these pathogenic bacteria are the highly resistant, versatile and possibly aggressive bacteria, Staphylococcus aureus. Lincosamide antibiotics were proved to be effective against this pathogen. This small, albeit important group of antibiotics is mostly active against Gram-positive bacteria, but also used against selected Gram-negative anaerobes and protozoa. S. aureus resistance to lincosamides can be acquired by modifications and/or mutations in the rRNA and rProteins. Here, we present the crystal structures of the large ribosomal subunit of S. aureus in complex with the lincosamides lincomycin and RB02, a novel semisynthetic derivative and discuss the biochemical aspects of the in vitro potency of various lincosamides. These results allow better understanding of the drugs selectivity as well as the importance of the various chemical moieties of the drug for binding and inhibition.

Indexed as

BenzamidesBinding SitesClindamycinCrystallizationCrystallography, X-RayDrug Resistance, MicrobialGalactosidesHydrogen BondingLincomycinLincosamidesMolecular StructureRibosome Subunits, Large, BacterialStaphylococcus aureusStatic ElectricityStructure-Activity RelationshipBenzamidesClindamycinGalactosidesLincomycinLincosamidesRB02 compound

Identifiers

PMID28973455
PMCPMC5622323
OpenAlexW2740577420

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.