Evidence map›Paper›PMID 28973454›Full record

ArticleNucleic acids research2017

Interplay between PTB and miR-1285 at the p53 3'UTR modulates the levels of p53 and its isoform Δ40p53α.

Aanchal Katoch, Biju George, Amrutha Iyyappan, Debjit Khan, Saumitra Das

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Conformational stability and dynamics of the cancer-associated isoform Δ133p53β are modulated by p53 peptides and p53-specific DNA.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Aanchal KatochDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
Biju GeorgeDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
Amrutha IyyappanDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
Debjit KhanDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
Saumitra DasDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
Indian Institute of Science Bangalore · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

p53 and its translational isoform Δ40p53 are involved in many important cellular functions like cell cycle, cell proliferation, differentiation and metabolism. Expression of both the isoforms can be regulated at different steps. In this study, we explored the role of 3'UTR in regulating the expression of these two translational isoforms. We report that the trans acting factor, Polypyrimidine Tract Binding protein (PTB), also interacts specifically with 3'UTR of p53 mRNA and positively regulates expression of p53 isoforms. Our results suggest that there is interplay between miRNAs and PTB at the 3'UTR under normal and stress conditions like DNA damage. Interestingly, PTB showed some overlapping binding regions in the p53 3'UTR with miR-1285. In fact, knockdown of miR-1285 as well as expression of p53 3'UTR with mutated miR-1285 binding sites resulted in enhanced association of PTB with the 3'UTR, which provides mechanistic insights of this interplay. Taken together, the results provide a plausible molecular basis of how the interplay between miRNAs and the PTB protein at the 3'UTR can play pivotal role in fine tuning the expression of the two p53 isoforms.

Indexed as

Genes, p533' Untranslated RegionsA549 CellsBinding SitesCell LineGene Expression RegulationHumansImmunoprecipitationMicroRNAsNucleic Acid ConformationPolymorphism, Single NucleotidePolypyrimidine Tract-Binding ProteinProtein BindingProtein IsoformsRNA InterferenceRNA, Messenger3' Untranslated RegionsMicroRNAsMIRN1285 microRNA, humanPolypyrimidine Tract-Binding ProteinProtein IsoformsRNA, MessengerRNA, Small InterferingTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID28973454
PMCPMC5622325
OpenAlexW2741332629

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.