Evidence map›Paper›PMID 28973399›Full record

ArticleHuman molecular genetics2017

Trichothiodystrophy causative TFIIEβ mutation affects transcription in highly differentiated tissue.

Arjan F Theil, Imke K Mandemaker, Emile van den Akker, Sigrid M A Swagemakers, Anja Raams, Tatjana Wüst, Jurgen A Marteijn, Jacques C Giltay, Richard M Colombijn, Ute Moog and 7 more

Open access · hybridAbstract readCase Reports
In one paragraph

Article in Human molecular genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 46 citations in OpenAlex.

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  12. DNA damage and repair: underlying mechanisms leading to microcephaly.Frontiers in cell and developmental biology · 2023
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  14. The life and death of RNA across temperatures.Computational and structural biotechnology journal · 2022
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  15. Article
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  18. Reduced levels of prostaglandin IProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 2 countries.

Arjan F TheilDepartment of Molecular Genetics, Cancer Genomics Netherlands, Erasmus MC, Rotterdam, The Netherlands.
Imke K MandemakerDepartment of Molecular Genetics, Cancer Genomics Netherlands, Erasmus MC, Rotterdam, The Netherlands.
Emile van den AkkerSanquin Research, Department of Hematopoiesis/Landsteiner Laboratory, Academic Medical Centre, University of Amsterdam, Amsterdam, The Netherlands.
Sigrid M A SwagemakersDepartment of Bioinformatics, Erasmus MC, Rotterdam, The Netherlands.
Anja RaamsDepartment of Molecular Genetics, Cancer Genomics Netherlands, Erasmus MC, Rotterdam, The Netherlands.
Tatjana WüstSanquin Research, Department of Hematopoiesis/Landsteiner Laboratory, Academic Medical Centre, University of Amsterdam, Amsterdam, The Netherlands.
Jurgen A MarteijnDepartment of Molecular Genetics, Cancer Genomics Netherlands, Erasmus MC, Rotterdam, The Netherlands.
Jacques C GiltayDepartment of Genetics, University Medical Center Utrecht, Utrecht, The Netherlands.
Richard M ColombijnRivas Zorggroep, Location Beatrixziekenhuis, Gorinchem, The Netherlands.
Ute MoogInstitute of Human Genetics, Heidelberg University, Heidelberg, Germany.
Urania KotzaeridouUniversity Children's Hospital Heidelberg, Heidelberg, Germany.
Mehrnaz GhazviniDepartment of Developmental Biology, iPS Core Facility, Erasmus MC, Rotterdam, The Netherlands.
Marieke von LindernSanquin Research, Department of Hematopoiesis/Landsteiner Laboratory, Academic Medical Centre, University of Amsterdam, Amsterdam, The Netherlands.
Jan H J HoeijmakersDepartment of Molecular Genetics, Cancer Genomics Netherlands, Erasmus MC, Rotterdam, The Netherlands.
Nicolaas G J JaspersDepartment of Molecular Genetics, Cancer Genomics Netherlands, Erasmus MC, Rotterdam, The Netherlands.
Peter J van der SpekDepartment of Bioinformatics, Erasmus MC, Rotterdam, The Netherlands.
Wim VermeulenDepartment of Molecular Genetics, Cancer Genomics Netherlands, Erasmus MC, Rotterdam, The Netherlands.
Erasmus MC · NLCancer Genomics Centre · NLSanquin · NLHeidelberg University · DEErasmus University Rotterdam · NLStreekziekenhuis Koningin Beatrix · NLUniversity Medical Center Utrecht · NL

Funding

European Research Council 340988
6 · The paper itself

Abstract

The rare recessive developmental disorder Trichothiodystrophy (TTD) is characterized by brittle hair and nails. Patients also present a variable set of poorly explained additional clinical features, including ichthyosis, impaired intelligence, developmental delay and anemia. About half of TTD patients are photosensitive due to inherited defects in the DNA repair and transcription factor II H (TFIIH). The pathophysiological contributions of unrepaired DNA lesions and impaired transcription have not been dissected yet. Here, we functionally characterize the consequence of a homozygous missense mutation in the general transcription factor II E, subunit 2 (GTF2E2/TFIIEβ) of two unrelated non-photosensitive TTD (NPS-TTD) families. We demonstrate that mutant TFIIEβ strongly reduces the total amount of the entire TFIIE complex, with a remarkable temperature-sensitive transcription defect, which strikingly correlates with the phenotypic aggravation of key clinical symptoms after episodes of high fever. We performed induced pluripotent stem (iPS) cell reprogramming of patient fibroblasts followed by in vitro erythroid differentiation to translate the intriguing molecular defect to phenotypic expression in relevant tissue, to disclose the molecular basis for some specific TTD features. We observed a clear hematopoietic defect during late-stage differentiation associated with hemoglobin subunit imbalance. These new findings of a DNA repair-independent transcription defect and tissue-specific malfunctioning provide novel mechanistic insight into the etiology of TTD.

Indexed as

Cell DifferentiationCellular ReprogrammingDNA HelicasesDNA RepairFemaleHumansInduced Pluripotent Stem CellsMaleMutationMutation, MissenseOrgan SpecificityPedigreeTranscription Factors, TFIITranscription, GeneticTrichothiodystrophy SyndromesDNA HelicasesTranscription Factors, TFIItranscription factor TFIIE

Identifiers

PMID28973399
PMCPMC5886110
OpenAlexW2753985039

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.