ArticlePloS one2017
EWET: Data collection and interface for the genetic analysis of Echinococcus multilocularis based on EmsB microsatellite.
Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed, 23 citations in OpenAlex.
- EmsB Microsatellite Analysis ofPathogens (Basel, Switzerland) · 2025Article
- Typing ofFrontiers in microbiology · 2025Article
- Detection of Asian genetic components in autochthonous humanOne health (Amsterdam, Netherlands) · 2023Article
- It's a small world for parasites: evidence supporting the North American invasion of EuropeanProceedings. Biological sciences · 2023Article
- Red foxes harbor two genetically distinct, spatially separated Echinococcus multilocularis clusters in Brandenburg, Germany.Parasites & vectors · 2021Article
- Assessment of the Genetic Diversity ofPathogens (Basel, Switzerland) · 2021Article
- Rodent control programmes can integrate Echinococcus multilocularis surveillance by facilitating parasite genotyping: the case of Arvicola terrestris voles screening in France.Parasitology research · 2021Article
- Microsatellite Investigations of MultiplePathogens (Basel, Switzerland) · 2020Article
- GenotypingPathogens (Basel, Switzerland) · 2020Article
- Asian Admixture in EuropeanFrontiers in veterinary science · 2020Article
- Genetic diversity ofFood and waterborne parasitology · 2019Article
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Authors and funding
14 authors at 5 institutions in 4 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Evolution and dispersion history on Earth of organisms can best be studied through biological markers in molecular epidemiological studies. The biological diversity of the cestode Echinococcus multilocularis was investigated in different cladistic approaches. First the morphological aspects were explored in connection with its ecology. More recently, molecular aspects were investigated to better understand the nature of the variations observed among isolates. The study of the tandemly repeated multilocus microsatellite EmsB allowed us to attain a high genetic diversity level where other classic markers have failed. Since 2006, EmsB data have been collected on specimens from various endemic foci of the parasite in Europe (in historic and newly endemic areas), Asia (China, Japan and Kyrgyzstan), and North America (Canada and Alaska). Biological data on the isolates and metadata were also recorded (e.g. host, geographical location, EmsB analysis, citation in the literature). In order to make available the data set of 1,166 isolates from classic and aberrant domestic and wild animal hosts (larval lesions and adult worms) and from human origin, an open web access interface, developed in PHP, and connected to a PostgreSQL database, was developed in the EmsB Website for the Echinococcus Typing (EWET) project. It allows researchers to access data collection, perform genetic analyses online (e.g. defining the genetic distance between their own samples and the samples in the database), consult distribution maps of EmsB profiles, and record and share their new EmsB genotyping data. In order to standardize the EmsB analyses performed in the different laboratories throughout the world, a calibrator was developed. The final aim of this project was to gather and arrange available data to permit to better understand the dispersion and transmission patterns of the parasite among definitive and intermediate hosts, in order to organize control strategies on the ground.
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